Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC009120.7-201ENST00000623452 780 ntBASIC7.26□□□□□ -1.25
MRE11P49959 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AL445984.1-201ENST00000637834 659 ntBASIC7.26□□□□□ -1.25
MRE11P49959 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AC096921.2-201ENST00000561507 1916 ntBASIC7.26□□□□□ -1.25
MRE11P49959 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
MRE11P49959 AL513548.1-201ENST00000562904 1724 ntBASIC7.26□□□□□ -1.25
MRE11P49959 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AP000473.2-201ENST00000602659 1537 ntBASIC7.26□□□□□ -1.25
MRE11P49959 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 RN7SKP55-201ENST00000364888 307 ntBASIC7.25□□□□□ -1.25
MRE11P49959 RNA5SP176-201ENST00000390956 110 ntBASIC7.25□□□□□ -1.25
MRE11P49959 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AHCYP8-201ENST00000425108 209 ntBASIC7.25□□□□□ -1.25
MRE11P49959 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.25□□□□□ -1.25
MRE11P49959 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 NDUFA5P1-201ENST00000433858 341 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 MTATP6P14-201ENST00000455189 673 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 RN7SL492P-201ENST00000460700 295 ntBASIC7.25□□□□□ -1.25
MRE11P49959 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 RPS3AP6-201ENST00000484430 795 ntBASIC7.25□□□□□ -1.25
MRE11P49959 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AC027338.1-201ENST00000514840 825 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.25□□□□□ -1.25
MRE11P49959 AP005902.2-201ENST00000518393 307 ntBASIC7.25□□□□□ -1.25
MRE11P49959 IGKV1D-22-201ENST00000518953 324 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 AC100854.1-201ENST00000520351 341 ntBASIC7.25□□□□□ -1.25
MRE11P49959 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.25□□□□□ -1.25
MRE11P49959 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
MRE11P49959 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.25□□□□□ -1.25
MRE11P49959 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC7.25□□□□□ -1.25
MRE11P49959 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 AC012414.2-201ENST00000559474 187 ntBASIC7.25□□□□□ -1.25
MRE11P49959 CD24P2-201ENST00000565486 219 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC063977.7-201ENST00000594454 337 ntBASIC7.25□□□□□ -1.25
MRE11P49959 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AC133794.1-201ENST00000602731 914 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC005776.1-201ENST00000603164 290 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AL671309.1-201ENST00000603750 544 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AC004890.3-201ENST00000605566 1095 ntBASIC7.25□□□□□ -1.25
MRE11P49959 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AL356608.1-201ENST00000610034 820 ntBASIC7.25□□□□□ -1.25
MRE11P49959 MIR6826-201ENST00000617808 98 ntBASIC7.25□□□□□ -1.25
MRE11P49959 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 AC006453.5-201ENST00000636451 619 ntBASIC7.25□□□□□ -1.25
MRE11P49959 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
MRE11P49959 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
MRE11P49959 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
MRE11P49959 AL132656.3-201ENST00000606384 1595 ntBASIC7.25□□□□□ -1.25
MRE11P49959 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
MRE11P49959 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
MRE11P49959 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
MRE11P49959 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
MRE11P49959 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
MRE11P49959 U3.10-201ENST00000364459 214 ntBASIC7.24□□□□□ -1.25
MRE11P49959 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
MRE11P49959 SNORA17A-201ENST00000391185 133 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AL035405.1-201ENST00000400795 710 ntBASIC7.24□□□□□ -1.25
MRE11P49959 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.24□□□□□ -1.25
MRE11P49959 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 BX510359.3-201ENST00000422168 306 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AC007064.3-201ENST00000422608 359 ntBASIC7.24□□□□□ -1.25
MRE11P49959 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 VTI1BP4-201ENST00000427516 527 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC073410.1-201ENST00000435125 589 ntBASIC7.24□□□□□ -1.25
MRE11P49959 RPS3AP38-201ENST00000435889 763 ntBASIC7.24□□□□□ -1.25
MRE11P49959 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC092106.2-201ENST00000436597 487 ntBASIC7.24□□□□□ -1.25
MRE11P49959 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.24□□□□□ -1.25
MRE11P49959 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms