Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP288-201ENST00000516227 268 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 OR4A46P-201ENST00000527255 933 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.94□□□□□ -1.62
NKX2-1P43699 ZNF322P1-201ENST00000568013 1209 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC122134.1-202ENST00000569111 1201 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC090774.2-201ENST00000584708 322 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 RPS4XP21-201ENST00000603814 750 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 RN7SL261P-201ENST00000613441 282 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.94□□□□□ -1.62
NKX2-1P43699 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC007204.1-201ENST00000621794 555 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC105105.5-201ENST00000622635 1294 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC079298.2-201ENST00000623885 459 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC092159.4-201ENST00000624944 550 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC099654.15-201ENST00000639802 509 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 THAP12P9-201ENST00000503971 2360 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NKX2-1P43699 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-1P43699 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-1P43699 AL031595.2-201ENST00000624215 19071 ntBASIC4.94□□□□□ -1.62
NKX2-1P43699 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-1P43699 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-1P43699 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NKX2-1P43699 SNORD115-48-201ENST00000364764 76 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 MIR138-2-201ENST00000384916 84 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NKX2-1P43699 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 GSTA12P-201ENST00000402398 508 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-1P43699 MYL6P5-201ENST00000412707 459 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 ZNF965P-201ENST00000432501 817 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AC092106.2-201ENST00000436597 487 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 BMS1P11-201ENST00000442351 885 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 BMS1P9-201ENST00000457640 885 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 RN7SL372P-201ENST00000461982 298 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-1P43699 RN7SL369P-201ENST00000477138 299 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 PDCL3P4-201ENST00000489621 720 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC024587.1-201ENST00000505925 2157 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 MTND3P24-201ENST00000506306 329 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC093870.1-201ENST00000506837 213 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 GLUD1P3-202ENST00000508551 200 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-1P43699 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 MINOS1P4-201ENST00000515470 318 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AL133399.1-201ENST00000527476 298 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 BCAS2P1-201ENST00000528022 632 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AC007346.2-201ENST00000564816 892 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AP001496.3-201ENST00000580230 913 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 FAM106CP-201ENST00000582212 507 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-1P43699 RN7SL475P-201ENST00000583379 298 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-1P43699 AC006115.2-201ENST00000596823 202 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 MTCO2P22-201ENST00000603246 681 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 SNORA74.4-201ENST00000607595 199 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AC019131.2-201ENST00000609071 870 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 AP000240.1-201ENST00000609910 452 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-1P43699 SNX18P12-201ENST00000624821 759 ntBASIC4.93□□□□□ -1.62
NKX2-1P43699 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms