Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 AP001541.1-201ENST00000623322 1904 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ABCD3P28288 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 MIR1275-201ENST00000408770 80 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC099535.1-201ENST00000408928 371 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 SNORA79B-201ENST00000410557 148 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 MTCYBP12-201ENST00000440559 1134 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 AC010240.2-201ENST00000445363 1205 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC118758.1-202ENST00000454719 225 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 RN7SL254P-201ENST00000460609 284 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 RN7SL165P-201ENST00000477476 291 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 RPL34P33-201ENST00000486062 334 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 RN7SL649P-201ENST00000496974 275 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 HAUS1P1-201ENST00000505275 832 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC091874.2-201ENST00000505889 720 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.74□□□□□ -1.49
ABCD3P28288 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 AC092865.1-201ENST00000544395 1023 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.74□□□□□ -1.49
ABCD3P28288 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 AC079148.1-201ENST00000565944 819 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 AP001823.1-201ENST00000604056 1003 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC034236.3-201ENST00000605999 461 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AL158211.2-201ENST00000607282 395 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AL080312.2-201ENST00000613001 630 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC006249.1-201ENST00000621223 471 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC004836.1-201ENST00000623032 634 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AL683826.1-201ENST00000624104 627 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC021766.1-201ENST00000624404 741 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
ABCD3P28288 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.74□□□□□ -1.49
ABCD3P28288 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.74□□□□□ -1.49
ABCD3P28288 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.74□□□□□ -1.49
ABCD3P28288 SMG1P7-201ENST00000565246 2704 ntBASIC5.74□□□□□ -1.49
ABCD3P28288 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
ABCD3P28288 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ABCD3P28288 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ABCD3P28288 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 SNORD8-201ENST00000363915 110 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 SNORA43.1-201ENST00000364863 140 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 SNORA70H-201ENST00000383910 135 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 SNORA70J-201ENST00000384182 135 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AP003170.5-201ENST00000397185 335 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 HMGB3P7-201ENST00000400214 611 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AL353692.2-201ENST00000407054 335 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ABCD3P28288 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.73□□□□□ -1.49
ABCD3P28288 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC245884.2-201ENST00000426257 404 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 RPSAP65-201ENST00000429660 595 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 ELOCP3-201ENST00000439303 348 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.73□□□□□ -1.49
ABCD3P28288 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.73□□□□□ -1.49
ABCD3P28288 AL022237.1-201ENST00000446663 358 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 HMGB1P7-201ENST00000450921 612 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 MTND2P6-201ENST00000455337 1030 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC103563.5-201ENST00000455643 364 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC104339.1-201ENST00000465478 348 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC108729.2-201ENST00000476543 840 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC020779.1-201ENST00000478757 796 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC021006.1-201ENST00000489849 553 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 AC122718.2-201ENST00000505325 591 ntBASIC5.73□□□□□ -1.49
ABCD3P28288 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms