Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC123769.1-201ENST00000530992 3192 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC4P09017 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 NPM1P37-201ENST00000403105 874 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 NIFKP3-201ENST00000417799 865 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 TRGV5P-201ENST00000419915 354 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AC117434.1-201ENST00000419971 836 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL450996.1-201ENST00000445574 1202 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AC073909.1-201ENST00000447112 999 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC079080.1-201ENST00000479841 822 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.68□□□□□ -1.5
HOXC4P09017 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AL589674.2-201ENST00000604304 337 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 AC104695.2-201ENST00000605056 775 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC069234.4-201ENST00000621276 412 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 FBXL21-201ENST00000297158 1305 ntBASIC5.68□□□□□ -1.5
HOXC4P09017 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HOXC4P09017 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.68□□□□□ -1.5
HOXC4P09017 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HOXC4P09017 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.68□□□□□ -1.5
HOXC4P09017 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC4P09017 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 HSPD1P8-201ENST00000400121 1658 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC232271.1-201ENST00000602455 2715 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 RNA5SP131-201ENST00000365452 119 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 GAPDHP42-201ENST00000406848 981 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC4P09017 VN1R21P-201ENST00000426703 765 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC4P09017 GAPDHP48-201ENST00000436626 961 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 OR7E116P-201ENST00000448529 957 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC4P09017 SLC25A51P1-201ENST00000468432 871 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC4P09017 AC087672.1-201ENST00000479876 766 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 RN7SL466P-201ENST00000497546 295 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.67□□□□□ -1.5
HOXC4P09017 AC105384.2-201ENST00000508433 640 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC109481.1-201ENST00000509173 282 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 RN7SKP67-201ENST00000515905 235 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 snoU109.5-201ENST00000516231 132 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.67□□□□□ -1.5
HOXC4P09017 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 MIR3176-201ENST00000582210 90 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 AC109309.2-201ENST00000612597 332 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 AC090607.5-201ENST00000615692 224 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 MIR6886-201ENST00000619864 61 ntBASIC5.67□□□□□ -1.5
HOXC4P09017 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HOXC4P09017 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.67□□□□□ -1.5
HOXC4P09017 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HOXC4P09017 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC4P09017 NLRP3P1-201ENST00000622303 1785 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms