Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.53□□□□□ -1.68
TRGV3P03979 AL513327.3-201ENST00000602618 469 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 AL034374.2-201ENST00000605281 548 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 AL133481.2-203ENST00000607558 139 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 AL365181.4-201ENST00000609800 547 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRGV3P03979 MIR6861-201ENST00000618657 64 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.53□□□□□ -1.68
TRGV3P03979 AC000095.2-202ENST00000637415 154 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRGV3P03979 AL022311.1-201ENST00000623726 19416 ntBASIC4.53□□□□□ -1.68
TRGV3P03979 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
TRGV3P03979 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TRGV3P03979 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.53□□□□□ -1.68
TRGV3P03979 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRGV3P03979 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.53□□□□□ -1.68
TRGV3P03979 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRGV3P03979 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.53□□□□□ -1.68
TRGV3P03979 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.69
TRGV3P03979 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRGV3P03979 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
TRGV3P03979 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.52□□□□□ -1.69
TRGV3P03979 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRGV3P03979 RNA5SP510-201ENST00000364697 99 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 RPS3AP2-201ENST00000407190 754 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC245060.4-201ENST00000413293 1121 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.52□□□□□ -1.69
TRGV3P03979 IPPKP1-201ENST00000422501 768 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AKR1B10P1-201ENST00000425765 942 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 VN1R21P-201ENST00000426703 765 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 CDY8P-201ENST00000428380 1279 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 USP24P1-201ENST00000433802 779 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 CDY20P-201ENST00000447528 1279 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AL451063.1-201ENST00000450164 1133 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 RSU1P1-201ENST00000453416 441 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AC004129.2-201ENST00000457229 287 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.52□□□□□ -1.69
TRGV3P03979 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC105384.2-201ENST00000508433 640 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 AP000648.1-201ENST00000529682 397 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.52□□□□□ -1.69
TRGV3P03979 NPM1P42-201ENST00000560329 862 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC006115.2-201ENST00000596823 202 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AL031601.1-201ENST00000605702 394 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AC108865.2-201ENST00000606881 432 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 AC093388.1-201ENST00000609166 430 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC4.52□□□□□ -1.69
TRGV3P03979 MIR1910-201ENST00000636955 80 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.52□□□□□ -1.69
TRGV3P03979 AC026523.2-201ENST00000625039 7739 ntBASIC4.52□□□□□ -1.69
TRGV3P03979 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TRGV3P03979 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
TRGV3P03979 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.52□□□□□ -1.69
TRGV3P03979 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRGV3P03979 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 AC123769.1-201ENST00000530992 3192 ntBASIC4.51□□□□□ -1.69
TRGV3P03979 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.51□□□□□ -1.69
TRGV3P03979 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TRGV3P03979 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
TRGV3P03979 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRGV3P03979 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms