Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.73□□□□□ -1.33
COL4A1P02462 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A1P02462 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.73□□□□□ -1.33
COL4A1P02462 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.73□□□□□ -1.33
COL4A1P02462 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A1P02462 NDUFB5P1-201ENST00000508134 564 ntBASIC6.73□□□□□ -1.33
COL4A1P02462 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A1P02462 RN7SKP99-201ENST00000517028 307 ntBASIC6.73□□□□□ -1.33
COL4A1P02462 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.73□□□□□ -1.33
COL4A1P02462 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
COL4A1P02462 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A1P02462 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A1P02462 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.73□□□□□ -1.33
COL4A1P02462 AC009237.13-201ENST00000603193 276 ntBASIC6.73□□□□□ -1.33
COL4A1P02462 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.73□□□□□ -1.33
COL4A1P02462 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
COL4A1P02462 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL4A1P02462 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL4A1P02462 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL4A1P02462 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A1P02462 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A1P02462 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 FABP7P2-201ENST00000429946 379 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A1P02462 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A1P02462 AC021106.1-201ENST00000509020 1058 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 OR5AZ1P-201ENST00000527448 943 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 AP000676.2-201ENST00000529711 301 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.72□□□□□ -1.33
COL4A1P02462 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL4A1P02462 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A1P02462 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A1P02462 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL4A1P02462 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.72□□□□□ -1.33
COL4A1P02462 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.72□□□□□ -1.33
COL4A1P02462 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.72□□□□□ -1.33
COL4A1P02462 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A1P02462 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
COL4A1P02462 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A1P02462 DBIP1-201ENST00000401435 260 ntBASIC6.71□□□□□ -1.33
COL4A1P02462 RN7SKP213-201ENST00000410746 298 ntBASIC6.71□□□□□ -1.33
COL4A1P02462 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A1P02462 RBMY2KP-201ENST00000418221 992 ntBASIC6.71□□□□□ -1.33
COL4A1P02462 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A1P02462 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A1P02462 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A1P02462 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.71□□□□□ -1.33
COL4A1P02462 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
COL4A1P02462 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.71□□□□□ -1.33
COL4A1P02462 AL133481.2-203ENST00000607558 139 ntBASIC6.71□□□□□ -1.33
COL4A1P02462 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.71□□□□□ -1.33
COL4A1P02462 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.71□□□□□ -1.33
COL4A1P02462 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.71□□□□□ -1.33
COL4A1P02462 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
COL4A1P02462 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL4A1P02462 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL4A1P02462 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 RN7SKP6-201ENST00000364795 319 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 MIR551A-201ENST00000385042 96 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 RPS27P18-201ENST00000431701 247 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AK3P5-201ENST00000432033 519 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.71□□□□□ -1.34
COL4A1P02462 GSTM5P1-201ENST00000434751 660 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 RPS23P9-201ENST00000448848 438 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AC104634.1-201ENST00000452720 462 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 HIGD1AP8-201ENST00000453927 274 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AZGP1P2-201ENST00000454506 345 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AC058823.1-201ENST00000485315 474 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AC022832.1-201ENST00000530718 645 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A1P02462 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.71□□□□□ -1.34
COL4A1P02462 AL513327.3-201ENST00000602618 469 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 AC091953.3-201ENST00000623220 236 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 MTCO1P1-201ENST00000624263 1081 ntBASIC6.71□□□□□ -1.34
COL4A1P02462 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL4A1P02462 MT-RNR2-201ENST00000387347 1559 ntBASIC6.7□□□□□ -1.34
COL4A1P02462 MFSD8-216ENST00000641147 4009 ntBASIC6.7□□□□□ -1.34
COL4A1P02462 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A1P02462 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
COL4A1P02462 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A1P02462 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL4A1P02462 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
COL4A1P02462 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms