Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLPTM1O96005 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CLPTM1O96005 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC011933.2-201ENST00000578539 2790 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLPTM1O96005 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLPTM1O96005 MTHFD2P5-201ENST00000320415 844 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLPTM1O96005 SNORD35A-201ENST00000363389 86 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 RNA5SP485-201ENST00000365053 119 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC003045.1-201ENST00000398779 713 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 GNG5P5-201ENST00000420444 220 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 AL139184.1-202ENST00000422303 222 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AL157884.1-201ENST00000424561 454 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 PRUNEP1-201ENST00000425846 705 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 HMGB1P32-201ENST00000425971 565 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AL354893.1-201ENST00000433735 348 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 RPL23AP60-201ENST00000450011 454 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 RN7SL39P-201ENST00000462264 297 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC098818.1-201ENST00000478593 252 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 RPL23AP40-201ENST00000487630 390 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.56□□□□□ -1.52
CLPTM1O96005 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 GUSBP9-201ENST00000510138 584 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 RN7SKP288-201ENST00000516227 268 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC021733.2-201ENST00000518830 497 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC007346.2-201ENST00000564816 892 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AL589863.1-201ENST00000595383 631 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AL162574.1-201ENST00000615702 950 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 LINC02495-203ENST00000636704 242 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC144833.1-201ENST00000567953 4089 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 AC011503.2-201ENST00000594230 1500 ntBASIC5.56□□□□□ -1.52
CLPTM1O96005 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLPTM1O96005 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
CLPTM1O96005 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.56□□□□□ -1.52
CLPTM1O96005 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.55□□□□□ -1.52
CLPTM1O96005 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
CLPTM1O96005 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 SNORD16-201ENST00000362803 99 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 RNA5SP77-201ENST00000365394 120 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 YWHAZP4-201ENST00000392459 708 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 RN7SKP279-201ENST00000411383 298 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.55□□□□□ -1.52
CLPTM1O96005 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC093816.1-201ENST00000515076 913 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.55□□□□□ -1.52
CLPTM1O96005 FTH1P11-201ENST00000517577 551 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC025857.1-201ENST00000525252 377 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AL133399.1-201ENST00000527476 298 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AC135983.3-201ENST00000528049 1226 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.55□□□□□ -1.52
CLPTM1O96005 AC124891.1-201ENST00000536322 519 ntBASIC5.55□□□□□ -1.52
CLPTM1O96005 AC078878.1-201ENST00000539832 958 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms