Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC013442.1-201ENST00000397347 228 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AL662791.3-201ENST00000413771 776 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.85□□□□□ -1.63
UPK1BO75841 RPL18AP14-201ENST00000417685 526 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 RANP7-201ENST00000418085 644 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 FTLP8-201ENST00000446770 267 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AL031584.1-201ENST00000447169 754 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 RPL34P33-201ENST00000486062 334 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 PMS2P3-207ENST00000529061 717 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.85□□□□□ -1.63
UPK1BO75841 AGGF1P7-201ENST00000562369 913 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC007066.2-202ENST00000566531 914 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 AL645933.2-201ENST00000606743 1207 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 BX005040.2-201ENST00000620504 370 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AC010809.3-201ENST00000621310 641 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1BO75841 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
UPK1BO75841 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
UPK1BO75841 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
UPK1BO75841 AC007342.5-201ENST00000571340 2142 ntBASIC4.85□□□□□ -1.63
UPK1BO75841 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1BO75841 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1BO75841 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1BO75841 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 RNA5SP296-201ENST00000410523 111 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 AL359633.1-201ENST00000421403 310 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC019205.1-201ENST00000421830 730 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.84□□□□□ -1.63
UPK1BO75841 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 RN7SL263P-201ENST00000467969 290 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 RPS12P31-201ENST00000491419 398 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 RN7SL608P-201ENST00000492377 279 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 RNA5SP206-201ENST00000516703 121 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.84□□□□□ -1.63
UPK1BO75841 TRIM51DP-201ENST00000529746 596 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 AC027026.1-201ENST00000532323 742 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC084121.1-201ENST00000533882 835 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPK1BO75841 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 PPIAP14-201ENST00000577627 496 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 MIR378H-201ENST00000579966 83 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 MIR4266-201ENST00000583300 55 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 OR7E19P-202ENST00000589942 844 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.84□□□□□ -1.63
UPK1BO75841 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.84□□□□□ -1.63
UPK1BO75841 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
UPK1BO75841 AP001823.1-201ENST00000604056 1003 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC145423.1-201ENST00000605712 336 ntBASIC4.84□□□□□ -1.63
UPK1BO75841 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms