Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 QRSL1P3-201ENST00000552666 1316 ntBASIC5.6□□□□□ -1.51
SNX3O60493 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SNX3O60493 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 MIR130A-201ENST00000385274 89 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 AC211486.3-201ENST00000412694 621 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX3O60493 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 AL353803.3-201ENST00000444641 335 ntBASIC5.6□□□□□ -1.51
SNX3O60493 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 AC012512.1-201ENST00000446594 718 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 PRPF38AP1-201ENST00000451976 933 ntBASIC5.6□□□□□ -1.51
SNX3O60493 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 ATP5LP5-201ENST00000483050 299 ntBASIC5.6□□□□□ -1.51
SNX3O60493 RN7SL350P-201ENST00000492591 299 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX3O60493 AC091912.1-201ENST00000511351 248 ntBASIC5.6□□□□□ -1.51
SNX3O60493 RN7SKP242-201ENST00000515967 289 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 TMEM97P2-201ENST00000517841 403 ntBASIC5.6□□□□□ -1.51
SNX3O60493 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.6□□□□□ -1.51
SNX3O60493 AC135983.3-201ENST00000528049 1226 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC103855.4-201ENST00000533158 265 ntBASIC5.6□□□□□ -1.51
SNX3O60493 PSMC1P8-201ENST00000536820 1296 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.6□□□□□ -1.51
SNX3O60493 MTCYBP13-201ENST00000578634 1093 ntBASIC5.6□□□□□ -1.51
SNX3O60493 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.6□□□□□ -1.51
SNX3O60493 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
SNX3O60493 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SNX3O60493 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.6□□□□□ -1.51
SNX3O60493 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SNX3O60493 MRRFP1-201ENST00000435941 1675 ntBASIC5.59□□□□□ -1.51
SNX3O60493 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNX3O60493 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SNX3O60493 SNORA21-201ENST00000362423 132 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX3O60493 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX3O60493 THEM7P-201ENST00000419556 672 ntBASIC5.59□□□□□ -1.51
SNX3O60493 GPN3P1-201ENST00000423883 535 ntBASIC5.59□□□□□ -1.51
SNX3O60493 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNX3O60493 HSPD1P12-201ENST00000429127 1069 ntBASIC5.59□□□□□ -1.51
SNX3O60493 RPL7AP49-201ENST00000429522 581 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL591438.1-201ENST00000433508 581 ntBASIC5.59□□□□□ -1.51
SNX3O60493 RPL12P18-201ENST00000437175 325 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AL592114.2-201ENST00000440142 532 ntBASIC5.59□□□□□ -1.51
SNX3O60493 TRIM60P16-201ENST00000444048 694 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AC090804.1-201ENST00000448870 490 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.59□□□□□ -1.51
SNX3O60493 RN7SL188P-201ENST00000469842 285 ntBASIC5.59□□□□□ -1.51
SNX3O60493 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX3O60493 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
SNX3O60493 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.59□□□□□ -1.51
SNX3O60493 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.59□□□□□ -1.51
SNX3O60493 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.59□□□□□ -1.51
SNX3O60493 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms