Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC145423.1-201ENST00000605712 336 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.84□□□□□ -1.63
SDCBPO00560 MIR6806-201ENST00000622141 64 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 OR11H2-202ENST00000641517 1085 ntBASIC4.84□□□□□ -1.63
SDCBPO00560 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SDCBPO00560 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.84□□□□□ -1.63
SDCBPO00560 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SDCBPO00560 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SDCBPO00560 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SDCBPO00560 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SDCBPO00560 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC104966.1-201ENST00000467010 1464 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 RN7SKP77-201ENST00000363261 353 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SDCBPO00560 MIR130B-202ENST00000385018 82 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC016739.1-201ENST00000405359 345 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 RPL35AP3-201ENST00000414680 288 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 RPS14P4-201ENST00000415880 418 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 KIF4CP-201ENST00000422742 1279 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.83□□□□□ -1.64
SDCBPO00560 OR10T1P-201ENST00000424327 947 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC118758.1-202ENST00000454719 225 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC068228.1-201ENST00000461723 211 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC023194.2-201ENST00000465398 406 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AL157777.1-201ENST00000468100 304 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC090602.1-201ENST00000469695 252 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.83□□□□□ -1.64
SDCBPO00560 RPS7P6-201ENST00000485777 579 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 OR51A1P-201ENST00000511110 946 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 SETP21-201ENST00000514799 892 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.83□□□□□ -1.64
SDCBPO00560 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC137627.1-201ENST00000545761 289 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.83□□□□□ -1.64
SDCBPO00560 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.83□□□□□ -1.64
SDCBPO00560 AL845552.1-201ENST00000556820 323 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC005244.1-201ENST00000582566 339 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC090236.2-201ENST00000587933 1101 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 AC244100.4-201ENST00000617747 388 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AL136228.1-201ENST00000622221 319 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 AL683826.1-201ENST00000624104 627 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 RPS2P45-201ENST00000469997 2057 ntBASIC4.83□□□□□ -1.64
SDCBPO00560 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.83□□□□□ -1.64
SDCBPO00560 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SDCBPO00560 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.82□□□□□ -1.64
SDCBPO00560 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 CASC19-238ENST00000641523 1558 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 MAPK10-328ENST00000641553 4009 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SDCBPO00560 AC096921.1-201ENST00000411661 375 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 DEFA9P-201ENST00000433042 285 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 PNKDP1-201ENST00000435914 430 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AL359265.1-201ENST00000440296 795 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms