Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 OR7M1P-201ENST00000608946 533 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AF117829.2-201ENST00000619538 361 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SNORA17.5-201ENST00000630429 132 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AP000432.2-201ENST00000624164 2048 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AL096800.1-201ENST00000405326 893 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 NACAP7-201ENST00000407371 609 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 BX323845.3-201ENST00000428215 527 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MTND6P12-201ENST00000428247 522 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 PCBP2P1-201ENST00000437262 977 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RAD1P2-201ENST00000446414 663 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AP006222.1-205ENST00000450734 457 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 NXT1P1-201ENST00000458481 316 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RN7SL174P-201ENST00000475578 289 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC114728.1-201ENST00000488289 483 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC083795.1-201ENST00000491760 320 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RN7SL101P-201ENST00000496350 279 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC106872.4-201ENST00000510050 523 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC079600.1-201ENST00000550326 297 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MIR4776-2-201ENST00000580204 80 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MIR4433B-201ENST00000581329 102 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC027334.1-201ENST00000603257 310 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 MIR6809-201ENST00000612189 116 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC096861.1-201ENST00000616652 240 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RBPJP7-201ENST00000442803 1447 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 RBPJP5-201ENST00000449433 1447 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 GNL2P1-201ENST00000451274 2190 ntBASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NPIPA3F8WFD2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 ICE2P1-201ENST00000512800 1849 ntBASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 RNU105B-201ENST00000364478 208 ntBASIC5.44□□□□□ -1.54
NPIPA3F8WFD2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms