Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC008833.1-201ENST00000611633 691 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC096861.1-201ENST00000616652 240 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC022400.9-201ENST00000623633 273 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 NEAT1-202ENST00000501122 22743 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AL133243.2-201ENST00000610331 1621 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 AC092111.2-201ENST00000611627 1414 ntBASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
KCNIP3Q9Y2W7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 Z83820.1-201ENST00000456978 1499 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RNA5SP211-201ENST00000365516 117 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL353133.1-201ENST00000407695 401 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL139100.1-201ENST00000408001 498 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RN7SKP205-201ENST00000410999 307 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 NMD3P2-201ENST00000421815 761 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 OR10T1P-201ENST00000424327 947 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC099677.3-201ENST00000427081 395 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 NPM1P22-201ENST00000427761 952 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC242426.1-201ENST00000435270 960 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC019185.3-201ENST00000438805 323 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 OR2L9P-201ENST00000444456 913 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC016027.4-201ENST00000450866 277 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC104164.1-201ENST00000460282 590 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 PSAT1P4-201ENST00000466500 526 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC090142.2-201ENST00000483263 416 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC025423.2-201ENST00000537570 439 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 OR4C49P-201ENST00000563891 900 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AP001823.1-201ENST00000604056 1003 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 HIRAP1-201ENST00000605318 787 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL121985.3-201ENST00000620690 523 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AC018558.4-201ENST00000622153 281 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 DLST-216ENST00000626051 252 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AP001029.2-203ENST00000589795 4910 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 QRSL1P3-201ENST00000552666 1316 ntBASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.88□□□□□ -1.63
KCNIP3Q9Y2W7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RNF19BPY-201ENST00000458209 1550 ntBASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
KCNIP3Q9Y2W7 RNU1-136P-201ENST00000384181 164 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms