Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 AC021766.1-201ENST00000624404 741 ntBASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 AC133552.1-201ENST00000569988 4007 ntBASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RCL1Q9Y2P8 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC015689.2-201ENST00000528172 1738 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 MIR138-2-201ENST00000384916 84 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 U3.28-201ENST00000391249 210 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 MRPL32P1-201ENST00000406301 247 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 SNRPEP6-201ENST00000407465 277 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 RNA5SP155-201ENST00000411154 129 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC015983.1-201ENST00000441577 373 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AL356133.1-201ENST00000444762 372 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 MEMO1P4-201ENST00000453590 386 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 CBX1P2-201ENST00000453841 458 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 RPL36AP55-201ENST00000454114 305 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 SEPT10P1-201ENST00000517342 1162 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 CYCSP25-201ENST00000525280 316 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC130366.1-201ENST00000526505 1192 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AP002004.1-206ENST00000532441 876 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 CCDC58P1-201ENST00000578567 430 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 NANOGP3-201ENST00000605855 286 ntBASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RCL1Q9Y2P8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RCL1Q9Y2P8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RCL1Q9Y2P8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RCL1Q9Y2P8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.65
RCL1Q9Y2P8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 MIR137-201ENST00000385223 102 ntBASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 AL358178.1-201ENST00000407698 397 ntBASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 RPL35AP31-201ENST00000418340 337 ntBASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 GPN3P1-201ENST00000423883 535 ntBASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RCL1Q9Y2P8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms