Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 BCORP1-203ENST00000513194 5093 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC087752.1-201ENST00000391360 558 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC016739.1-201ENST00000405359 345 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 SNRPEP6-201ENST00000407465 277 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RNU2-18P-201ENST00000411224 162 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP279-201ENST00000411383 298 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC069154.1-201ENST00000432914 542 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 GAPDHP75-201ENST00000433910 943 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AMYP1-201ENST00000440059 1023 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RPS7P3-201ENST00000443360 580 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 GEMIN2P1-201ENST00000454246 752 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RN7SL170P-201ENST00000487098 295 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 EIF3LP3-201ENST00000495197 822 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC008629.2-201ENST00000503783 483 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 LDHAP1-201ENST00000509421 992 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP70-201ENST00000516655 271 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 OR7E158P-201ENST00000524483 910 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC007346.2-201ENST00000564816 892 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC145423.1-201ENST00000605712 336 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL445670.1-201ENST00000618889 801 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AL136228.1-201ENST00000622221 319 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 LYARP1-201ENST00000436977 1501 ntBASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRAPPC4Q9Y296 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC130304.1-201ENST00000622942 2385 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC020656.2-201ENST00000613291 5309 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL137141.1-201ENST00000624622 4836 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 VN1R12P-201ENST00000403778 876 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL358178.1-201ENST00000407698 397 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL121878.1-201ENST00000418638 859 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RPL24P2-201ENST00000421023 475 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 KIF4CP-201ENST00000422742 1279 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL445928.1-201ENST00000435545 222 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 VN1R110P-201ENST00000438988 971 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 BMS1P10-201ENST00000443754 1120 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RPS23P9-201ENST00000448848 438 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RN7SL269P-201ENST00000467795 305 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 PFN1P6-201ENST00000476786 399 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RN7SL741P-201ENST00000482473 289 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RN7SKP288-201ENST00000516227 268 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 SCARNA18.1-201ENST00000516330 83 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC084824.2-201ENST00000548906 345 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC009852.2-201ENST00000567898 485 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms