Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 SEPT2P1-201ENST00000419651 180 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 RPL5P34-201ENST00000426545 891 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 E2F6P1-201ENST00000428850 745 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC114402.2-201ENST00000432760 643 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL604028.2-201ENST00000437848 788 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL845321.1-201ENST00000444603 348 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 TPMTP4-201ENST00000450749 678 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MED28P7-201ENST00000456611 530 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 RN7SL325P-201ENST00000460434 283 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 RPL23P10-201ENST00000468780 412 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC117394.1-201ENST00000477323 567 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 XKRY-201ENST00000510392 1100 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 OR5BM1P-201ENST00000512021 366 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AP005597.2-201ENST00000526238 341 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 MIR5682-201ENST00000584864 76 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC105129.3-201ENST00000605455 485 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL354976.1-201ENST00000613843 387 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC092140.2-201ENST00000618027 521 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC074140.1-201ENST00000621617 208 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AP003072.4-201ENST00000624580 310 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CDRT1-208ENST00000630868 794 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC016745.2-201ENST00000608834 3443 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 AC005614.1-201ENST00000598952 3653 ntBASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRAIPQ9BWF2 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 PRNCR1-201ENST00000635449 12727 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 HSPA8P17-201ENST00000427029 1382 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL512353.3-201ENST00000417517 1326 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AP000776.1-201ENST00000530032 1663 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RNU4-4P-201ENST00000364588 130 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 SNORD65.1-201ENST00000390889 71 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL590084.2-201ENST00000401481 382 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC098592.1-201ENST00000419352 333 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC027124.1-201ENST00000440852 466 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC104306.1-201ENST00000449702 371 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 OR7E7P-201ENST00000455678 1012 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RPSAP24-201ENST00000461543 873 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 AC040975.1-201ENST00000472104 316 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 BZW1P2-201ENST00000473537 826 ntBASIC7.87□□□□□ -1.15
TRAIPQ9BWF2 RPL5P12-201ENST00000477071 851 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms