Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 MIR621-201ENST00000384919 96 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AL139415.1-201ENST00000424862 352 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX3Q99909 XKRYP6-201ENST00000440468 1116 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 XKRYP3-201ENST00000442113 1116 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 C1DP3-201ENST00000455013 423 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AL356390.1-201ENST00000455684 397 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 HSPE1P22-201ENST00000456856 327 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 AC106822.1-201ENST00000502647 526 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 NPM1P27-201ENST00000502784 830 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 SNORA48.9-201ENST00000516419 162 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AL133399.1-201ENST00000527476 298 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC008055.1-201ENST00000547032 609 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX3Q99909 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC024589.2-201ENST00000605642 1294 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AL592494.3-201ENST00000609485 464 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 AC020658.4-201ENST00000613987 684 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 MIR6721-201ENST00000617181 87 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 MIR6811-201ENST00000620409 58 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.2□□□□□ -1.58
SSX3Q99909 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX3Q99909 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
SSX3Q99909 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.2□□□□□ -1.58
SSX3Q99909 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 AF287957.1-201ENST00000607368 1595 ntBASIC5.2□□□□□ -1.58
SSX3Q99909 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SSX3Q99909 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 SAGE3P-201ENST00000619800 1635 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 HSPA8P17-201ENST00000427029 1382 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 MIR365B-201ENST00000362317 111 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 SNORD35A-201ENST00000363389 86 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 GNG5P2-201ENST00000372054 207 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX3Q99909 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SSX3Q99909 HMGB3P7-201ENST00000400214 611 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RPL5P19-201ENST00000404228 893 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 MIR1275-201ENST00000408770 80 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 RN7SKP281-201ENST00000410472 352 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX3Q99909 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 RPL23AP85-201ENST00000421838 433 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 OSTCP4-201ENST00000424397 449 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 MED28P4-201ENST00000433137 572 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 OR2L9P-201ENST00000444456 913 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RSL24D1P2-201ENST00000445584 366 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC104339.1-201ENST00000465478 348 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 AL355032.1-201ENST00000472981 438 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AC021006.1-201ENST00000489849 553 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RN7SL362P-201ENST00000494228 267 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AC091965.3-201ENST00000506236 208 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX3Q99909 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.19□□□□□ -1.58
SSX3Q99909 RNA5SP473-201ENST00000516402 125 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 RNA5SP441-201ENST00000516809 88 ntBASIC5.19□□□□□ -1.58
SSX3Q99909 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 794.1 ms