Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
LRCH3Q96II8 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC007342.7-201ENST00000624610 2337 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 MIR369-201ENST00000362155 70 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 RNA5SP209-201ENST00000411237 97 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC113618.1-201ENST00000416747 285 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 RAB28P3-201ENST00000448325 597 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC074386.1-201ENST00000476560 767 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 MTND1P3-201ENST00000484956 952 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AL163540.1-201ENST00000485382 386 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 SNRPD2P1-201ENST00000489253 354 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC012170.1-201ENST00000495139 359 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC103851.1-201ENST00000506833 274 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC109635.6-201ENST00000525487 1113 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC127029.1-201ENST00000560822 237 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 AL121782.1-201ENST00000611242 413 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 AC108479.2-201ENST00000617314 601 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 MIR6778-201ENST00000617912 73 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC8.56□□□□□ -1.04
LRCH3Q96II8 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC8.56□□□□□ -1.04
LRCH3Q96II8 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LRCH3Q96II8 DCAF13P3-201ENST00000561147 1334 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC023886.2-201ENST00000321285 411 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 Y_RNA.193-201ENST00000363979 102 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 RNU6-1251P-201ENST00000364502 107 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 RNU6-639P-201ENST00000384074 107 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 MT-TG-201ENST00000387429 68 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 SNORD65.1-201ENST00000390889 71 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC016769.2-201ENST00000414815 475 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC092042.2-201ENST00000417304 331 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC007394.1-201ENST00000421941 531 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 SPATA20P1-201ENST00000423089 438 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 Y_RNA.639-201ENST00000458981 102 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 RPL37P23-201ENST00000492641 294 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC139783.2-201ENST00000504847 1145 ntBASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.55□□□□□ -1.04
LRCH3Q96II8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms