Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.42□□□□□ -1.22
DDX11Q96FC9 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
DDX11Q96FC9 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 SNORA77.2-201ENST00000408571 112 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 DHFRP2-201ENST00000414224 547 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 CYP4F30P-202ENST00000420048 405 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL645936.1-201ENST00000441979 518 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 OR52I1-201ENST00000450052 1050 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL451063.1-201ENST00000450164 1133 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 RPS26P41-201ENST00000450370 284 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 DUXAP8-207ENST00000456786 622 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC009963.3-201ENST00000458090 486 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC106800.3-201ENST00000511389 308 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC135626.1-201ENST00000556983 435 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 GLYATL1P2-202ENST00000588046 902 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC074141.1-201ENST00000588129 2995 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL138895.2-201ENST00000603019 178 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AL049840.6-201ENST00000604583 345 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC093424.1-201ENST00000604999 338 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC024589.2-201ENST00000605642 1294 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 DUXAP10-204ENST00000612052 616 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC073488.6-201ENST00000632293 754 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC007159.1-201ENST00000566529 4706 ntBASIC7.41□□□□□ -1.22
DDX11Q96FC9 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
DDX11Q96FC9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
DDX11Q96FC9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DDX11Q96FC9 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DDX11Q96FC9 SNORD8-201ENST00000363915 110 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
DDX11Q96FC9 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 UBE2D3P3-201ENST00000426992 425 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
DDX11Q96FC9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC094085.1-201ENST00000468914 584 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC090589.1-201ENST00000473109 362 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 MTCYBP35-201ENST00000503630 1137 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 SNX18P24-201ENST00000505249 671 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 UGT2A3P7-201ENST00000510485 734 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 SNORA81.2-201ENST00000516868 170 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC090115.2-201ENST00000548060 883 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 MRPS36P5-201ENST00000551909 298 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC009120.3-201ENST00000563335 499 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC079148.1-201ENST00000565944 819 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 FAM72A-208ENST00000607379 1139 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 SNORA35B-201ENST00000607417 129 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 AP000676.4-201ENST00000624659 623 ntBASIC7.4□□□□□ -1.22
DDX11Q96FC9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.4□□□□□ -1.22
DDX11Q96FC9 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms