Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 MIR122-201ENST00000385044 85 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 MARK2P12-201ENST00000420129 585 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RNF19BPX-201ENST00000426224 625 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 PSMD10P2-201ENST00000432890 672 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL645936.1-201ENST00000441979 518 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC245291.3-201ENST00000443400 292 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 CUBNP2-201ENST00000443534 1139 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ZNF619P1-201ENST00000446539 752 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL445991.1-201ENST00000450381 475 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 CABYRP1-201ENST00000465493 1045 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC090958.1-201ENST00000511122 351 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 SNORA76.2-201ENST00000517095 137 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 MTND2P17-201ENST00000550281 688 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 MIR3157-201ENST00000578688 85 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 RN7SL339P-201ENST00000580597 296 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AP005136.2-201ENST00000583253 1049 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC119403.2-201ENST00000590960 598 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC006116.5-201ENST00000591936 559 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL133247.2-201ENST00000603236 482 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL357094.1-201ENST00000603845 844 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AP001823.1-201ENST00000604056 1003 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC048344.4-201ENST00000619744 527 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC099654.9-201ENST00000637055 678 ntBASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.23□□□□□ -1.41
ATG4AQ8WYN0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RNA5SP110-201ENST00000362638 115 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RNU6-584P-201ENST00000410350 95 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC245096.1-201ENST00000413104 546 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 NPM1P26-201ENST00000426339 738 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL512637.2-201ENST00000431287 1256 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 GAPDHP19-201ENST00000431768 1005 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 MTND1P26-201ENST00000440488 538 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL590004.3-202ENST00000445883 451 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RPS3AP53-201ENST00000454716 778 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC093663.2-201ENST00000484625 313 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 RNU6-889P-201ENST00000517189 103 ntBASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.22□□□□□ -1.41
ATG4AQ8WYN0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms