Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 PPBPP2-201ENST00000513150 1362 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC140479.2-201ENST00000421567 3130 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 RN7SKP17-201ENST00000411242 351 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC073410.1-201ENST00000435125 589 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC022730.1-201ENST00000473114 568 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 RN7SL790P-201ENST00000474043 298 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 GM2AP2-201ENST00000491764 562 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 SNX18P24-201ENST00000505249 671 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC016550.1-201ENST00000505348 785 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 OR4D12P-201ENST00000509361 911 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 RN7SKP157-201ENST00000516174 282 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 MTND1P6-201ENST00000523621 946 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC079148.1-201ENST00000565944 819 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC027796.1-201ENST00000575593 512 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 MIR4732-201ENST00000581873 76 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC090774.2-201ENST00000584708 322 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 BNIP3P31-201ENST00000604515 566 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 KATNBL1P5-201ENST00000605015 517 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AL390877.1-201ENST00000605704 214 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC120053.1-201ENST00000607706 736 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 uc_338.26-201ENST00000612659 160 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AP005435.3-201ENST00000531260 3198 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC011933.2-201ENST00000578539 2790 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC006600.2-201ENST00000624834 2506 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHFQ7M4L6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC217777.1-201ENST00000570034 1471 ntBASIC5.45□□□□□ -1.54
SHFQ7M4L6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.45□□□□□ -1.54
SHFQ7M4L6 AC109446.4-201ENST00000623235 2755 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC005224.3-201ENST00000584683 2140 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC004158.1-201ENST00000564508 4319 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 MIR431-201ENST00000385266 114 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 UBTFL2-201ENST00000411859 1191 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 DHFRP2-201ENST00000414224 547 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 PTCD2P2-201ENST00000415579 1095 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms