Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AF230666.2-201ENST00000602328 725 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC019080.5-201ENST00000624891 757 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC097063.1-201ENST00000426714 1797 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC092724.1-201ENST00000624623 3397 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC022164.1-201ENST00000568767 2673 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 AC010132.4-201ENST00000569883 1368 ntBASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
PTCHD4Q6ZW05 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 OR7A2P-201ENST00000304105 930 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 U3.52-201ENST00000384034 216 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RN7SKP151-201ENST00000410230 316 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RN7SKP129-201ENST00000410288 299 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RMRPP5-201ENST00000411156 267 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL158827.1-201ENST00000416300 391 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RPL7AP14-201ENST00000424041 802 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC016027.5-201ENST00000427227 210 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 E2F6P1-201ENST00000428850 745 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC125238.2-201ENST00000430003 1440 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 E2F6P3-201ENST00000441743 743 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL356133.1-201ENST00000444762 372 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL157884.3-201ENST00000448273 1184 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL627224.1-201ENST00000448334 444 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 CCRL1P1-201ENST00000449542 1053 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RPL7P55-201ENST00000450522 746 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RPL23AP23-201ENST00000452590 471 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RPS27AP3-201ENST00000453803 454 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC063955.1-201ENST00000462872 685 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RN7SL70P-201ENST00000478322 302 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 SETP6-201ENST00000479329 568 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC008410.1-201ENST00000483777 339 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC021146.5-201ENST00000503544 545 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC021087.2-201ENST00000504656 1203 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL158068.1-201ENST00000506116 616 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC008868.1-201ENST00000509786 737 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 RN7SKP196-201ENST00000516267 345 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC130366.1-201ENST00000526505 1192 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC087894.1-201ENST00000538359 518 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC010287.1-201ENST00000566916 357 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 MIR4509-3-201ENST00000578671 94 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC090616.1-201ENST00000583895 447 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 MIR4509-2-201ENST00000583920 94 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 EIF1P5-201ENST00000585002 234 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC090241.1-201ENST00000587732 621 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 BNIP3P32-201ENST00000600015 554 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AP001267.4-201ENST00000602598 545 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC023206.1-201ENST00000605824 298 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AL512413.1-201ENST00000606489 382 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 MIR8082-201ENST00000612488 81 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 AC015922.4-201ENST00000612568 690 ntBASIC5.78□□□□□ -1.48
PTCHD4Q6ZW05 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms