Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 BRWD1P3-201ENST00000428816 390 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AL022331.1-201ENST00000429025 477 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 CUBNP2-201ENST00000443534 1139 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC002075.1-201ENST00000457396 676 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 RN7SL547P-201ENST00000490793 290 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC108693.1-201ENST00000496068 432 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AL049872.1-201ENST00000556323 322 ntBASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SHROOM1Q2M3G4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SHROOM1Q2M3G4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.77□□□□□ -1.32
SHROOM1Q2M3G4 AC109780.1-201ENST00000451768 1344 ntBASIC6.77□□□□□ -1.32
SHROOM1Q2M3G4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC006511.3-201ENST00000624929 1783 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 SETP9-201ENST00000423837 832 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AP000547.1-201ENST00000454360 617 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL133445.1-201ENST00000467051 452 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC099521.1-201ENST00000482557 334 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC073610.1-201ENST00000489971 396 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC090651.1-201ENST00000567865 634 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL021707.7-201ENST00000607991 416 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 AL355377.1-201ENST00000621125 1653 ntBASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SHROOM1Q2M3G4 FBXL21-201ENST00000297158 1305 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 RNA5SP131-201ENST00000365452 119 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AL353626.3-201ENST00000413399 657 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 COPS8P2-201ENST00000473228 627 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 PPP1R11P1-201ENST00000486095 376 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AL035690.1-201ENST00000490892 383 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 HMGN2P47-201ENST00000559378 272 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 MIR4433B-201ENST00000581329 102 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 THAP12P9-201ENST00000503971 2360 ntBASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
SHROOM1Q2M3G4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 AP004607.3-201ENST00000530354 3915 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 C4BPAP1-201ENST00000415474 1893 ntBASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SHROOM1Q2M3G4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms