Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC022306.1-201ENST00000560489 1562 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 GVINP1-202ENST00000531871 7271 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC110792.3-201ENST00000595906 1614 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SCN1BQ07699 SNORD35A-201ENST00000363389 86 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 MRPS6P2-201ENST00000381143 370 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC002524.1-201ENST00000411687 547 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AL445528.1-201ENST00000426330 420 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC022022.1-201ENST00000430304 178 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 MTCYBP29-201ENST00000436327 1006 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AL512637.1-201ENST00000439523 1231 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AP002345.1-201ENST00000456493 928 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 OR9A1P-202ENST00000484361 945 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 RPS27AP18-201ENST00000515536 459 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN1BQ07699 COX6B1P4-201ENST00000519826 484 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC138832.1-201ENST00000522871 556 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC244502.2-201ENST00000543361 851 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC026956.1-201ENST00000558741 396 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC023968.1-201ENST00000560719 475 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC133552.4-201ENST00000576103 676 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AL136097.3-201ENST00000611097 505 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 MIR6849-201ENST00000618543 69 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC096708.4-201ENST00000620563 552 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 AC007204.1-201ENST00000621794 555 ntBASIC5.39□□□□□ -1.55
SCN1BQ07699 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SCN1BQ07699 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.39□□□□□ -1.55
SCN1BQ07699 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SCN1BQ07699 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCN1BQ07699 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCN1BQ07699 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 GSTA12P-201ENST00000402398 508 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC017019.1-201ENST00000426129 261 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AP003385.1-201ENST00000426387 893 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 TRIM60P13-201ENST00000432350 1283 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AC046176.1-201ENST00000435260 1170 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AC010240.2-201ENST00000445363 1205 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 CALM1P2-201ENST00000452941 448 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC063955.1-201ENST00000462872 685 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 RN7SL197P-201ENST00000466981 299 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 IGHV3-63-201ENST00000518422 341 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms