Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HIST1H1AQ02539 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 RN7SKP184-201ENST00000362348 333 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 MIR188-201ENST00000385034 86 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 OOSP1-201ENST00000398992 1270 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SETP15-201ENST00000412724 337 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 RPL7AP51-201ENST00000422016 760 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SEPT14P12-201ENST00000442280 560 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC092106.1-201ENST00000444291 373 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC097359.1-201ENST00000447946 463 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC002553.3-201ENST00000453002 341 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC069304.1-201ENST00000491593 704 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC113367.2-201ENST00000505749 160 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 GLUD1P3-202ENST00000508551 200 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 ZNF519P4-201ENST00000514008 125 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 RNU6-513P-201ENST00000516104 104 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AL390334.1-201ENST00000556395 450 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 DPRXP4-201ENST00000578053 568 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AP005262.1-201ENST00000582646 997 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC119403.2-201ENST00000590960 598 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC092944.2-201ENST00000605443 889 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AL645933.2-201ENST00000606743 1207 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AL355974.3-201ENST00000617383 467 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SNX18P12-201ENST00000624821 759 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 MTCO1P28-201ENST00000574177 1528 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 SAMMSON-213ENST00000641336 1521 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 AC008079.2-201ENST00000623543 20396 ntBASIC4.49□□□□□ -1.69
HIST1H1AQ02539 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HIST1H1AQ02539 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC119674.1-202ENST00000641333 1860 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC063923.1-201ENST00000478982 1619 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RN7SKP74-201ENST00000362849 309 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RNU1-134P-201ENST00000362935 165 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RNA5SP296-201ENST00000410523 111 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC002524.1-201ENST00000411687 547 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC130360.1-201ENST00000425489 1117 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RPSAP32-201ENST00000432681 526 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 ARMC4P1-201ENST00000438905 707 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 RPS10P18-201ENST00000442662 495 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC023271.1-201ENST00000445936 1090 ntBASIC4.48□□□□□ -1.69
HIST1H1AQ02539 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms