Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 AC087752.1-201ENST00000391360 558 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 AC073410.1-201ENST00000435125 589 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 OR7E116P-201ENST00000448529 957 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 LRRC37A14P-201ENST00000452297 462 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.54□□□□□ -1.2
RIPK4P57078 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 AC020978.7-201ENST00000575953 1187 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 RNA5SP440-201ENST00000612665 119 ntBASIC7.54□□□□□ -1.2
RIPK4P57078 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.54□□□□□ -1.2
RIPK4P57078 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.54□□□□□ -1.2
RIPK4P57078 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.54□□□□□ -1.2
RIPK4P57078 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RIPK4P57078 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RIPK4P57078 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RIPK4P57078 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
RIPK4P57078 SRRM1P3-201ENST00000426911 2678 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 RN7SKP69-201ENST00000365390 305 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 RN7SKP269-201ENST00000365545 319 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 RPL34P3-201ENST00000421454 338 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 CRIP1P1-201ENST00000427567 185 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 RSU1P1-201ENST00000453416 441 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 DUTP1-201ENST00000493631 470 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 AC074255.1-201ENST00000511259 501 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 RNU6-615P-201ENST00000516065 106 ntBASIC7.53□□□□□ -1.2
RIPK4P57078 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.53□□□□□ -1.2
RIPK4P57078 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.53□□□□□ -1.2
RIPK4P57078 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RIPK4P57078 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
RIPK4P57078 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.53□□□□□ -1.2
RIPK4P57078 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.53□□□□□ -1.2
RIPK4P57078 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.53□□□□□ -1.2
RIPK4P57078 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RIPK4P57078 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RIPK4P57078 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 RN7SKP81-201ENST00000365603 331 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 MIR130A-201ENST00000385274 89 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RIPK4P57078 RNA5SP91-201ENST00000390902 119 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AC092651.1-201ENST00000426110 312 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.52□□□□□ -1.21
RIPK4P57078 AC002504.1-201ENST00000438281 691 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.52□□□□□ -1.21
RIPK4P57078 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 RPS27AP2-201ENST00000457576 465 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RIPK4P57078 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.52□□□□□ -1.21
RIPK4P57078 OR7E157P-201ENST00000494376 911 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.52□□□□□ -1.21
RIPK4P57078 AC126615.2-201ENST00000553003 515 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 HSPE1P2-201ENST00000554777 306 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AC010547.6-201ENST00000571789 193 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AL133481.2-203ENST00000607558 139 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.52□□□□□ -1.21
RIPK4P57078 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RIPK4P57078 AC011933.2-201ENST00000578539 2790 ntBASIC7.52□□□□□ -1.21
RIPK4P57078 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RIPK4P57078 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.51□□□□□ -1.21
RIPK4P57078 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RIPK4P57078 RNA5SP46-201ENST00000362370 120 ntBASIC7.51□□□□□ -1.21
RIPK4P57078 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.51□□□□□ -1.21
RIPK4P57078 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.51□□□□□ -1.21
RIPK4P57078 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms