Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC004158.1-201ENST00000564508 4319 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
PKNOX1P55347 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 RN7SKP250-201ENST00000363924 321 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 RBBP4P5-201ENST00000398583 1266 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 NPM1P37-201ENST00000403105 874 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 RNU6-233P-201ENST00000410845 141 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 THEM7P-201ENST00000419556 672 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 NPM1P18-201ENST00000434232 732 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 RN7SL568P-201ENST00000493069 298 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 RPSAP51-201ENST00000497462 645 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC106822.1-201ENST00000502647 526 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 KATNBL1P4-201ENST00000503545 918 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 NPM1P21-201ENST00000513394 762 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 GAPDHP62-201ENST00000515313 990 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC116917.1-201ENST00000520558 305 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC005244.1-201ENST00000582566 339 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC011500.1-201ENST00000601963 469 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC004801.6-201ENST00000616571 978 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AC241377.1-201ENST00000619797 406 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 AL136228.1-201ENST00000622221 319 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.63□□□□□ -1.51
PKNOX1P55347 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PKNOX1P55347 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.63□□□□□ -1.51
PKNOX1P55347 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.63□□□□□ -1.51
PKNOX1P55347 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
PKNOX1P55347 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.63□□□□□ -1.51
PKNOX1P55347 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PKNOX1P55347 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PKNOX1P55347 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.62□□□□□ -1.51
PKNOX1P55347 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 SNORA51.9-201ENST00000384295 124 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 AL096711.1-201ENST00000404780 554 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 OR10T1P-201ENST00000424327 947 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AL139158.1-201ENST00000424719 340 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 EIF5AP4-201ENST00000441206 465 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 OR7E116P-201ENST00000448529 957 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.62□□□□□ -1.51
PKNOX1P55347 RN7SL197P-201ENST00000466981 299 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC112484.3-201ENST00000505910 329 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 GAPDHP71-201ENST00000511530 1003 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.62□□□□□ -1.51
PKNOX1P55347 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.62□□□□□ -1.51
PKNOX1P55347 RPA2P1-201ENST00000556557 721 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AC121758.1-202ENST00000556917 658 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC090236.2-201ENST00000587933 1101 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 AL035661.1-201ENST00000620459 1144 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 OR11H2-202ENST00000641517 1085 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AC125336.1-201ENST00000508893 2827 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PKNOX1P55347 PSG10P-201ENST00000501199 1500 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 UGT2B24P-201ENST00000514441 1597 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.62□□□□□ -1.51
PKNOX1P55347 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
PKNOX1P55347 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PKNOX1P55347 AL022311.1-201ENST00000623726 19416 ntBASIC5.62□□□□□ -1.51
PKNOX1P55347 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PKNOX1P55347 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PKNOX1P55347 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms