Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPB1P53618 OR51C1P-202ENST00000641159 1444 ntBASIC6.5□□□□□ -1.37
COPB1P53618 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
COPB1P53618 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COPB1P53618 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
COPB1P53618 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.49□□□□□ -1.37
COPB1P53618 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COPB1P53618 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.49□□□□□ -1.37
COPB1P53618 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COPB1P53618 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPB1P53618 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COPB1P53618 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPB1P53618 RNA5SP514-201ENST00000363717 111 ntBASIC6.49□□□□□ -1.37
COPB1P53618 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPB1P53618 PSMA6P1-201ENST00000400275 741 ntBASIC6.49□□□□□ -1.37
COPB1P53618 RNA5SP198-201ENST00000410376 127 ntBASIC6.49□□□□□ -1.37
COPB1P53618 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.49□□□□□ -1.37
COPB1P53618 CR848007.2-201ENST00000424918 787 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC099677.3-201ENST00000427081 395 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 FTLP8-201ENST00000446770 267 ntBASIC6.49□□□□□ -1.37
COPB1P53618 MTCYBP14-201ENST00000457471 715 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC018635.1-201ENST00000468292 1030 ntBASIC6.49□□□□□ -1.37
COPB1P53618 SEPT7P6-201ENST00000469999 1143 ntBASIC6.49□□□□□ -1.37
COPB1P53618 PDCL3P4-201ENST00000489621 720 ntBASIC6.49□□□□□ -1.37
COPB1P53618 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.49□□□□□ -1.37
COPB1P53618 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPB1P53618 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 MT1CP-201ENST00000567054 174 ntBASIC6.49□□□□□ -1.37
COPB1P53618 MTND2P13-201ENST00000577438 1039 ntBASIC6.49□□□□□ -1.37
COPB1P53618 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 AL713998.2-201ENST00000604538 1198 ntBASIC6.49□□□□□ -1.37
COPB1P53618 MIR6778-201ENST00000617912 73 ntBASIC6.49□□□□□ -1.37
COPB1P53618 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.49□□□□□ -1.37
COPB1P53618 AC006249.1-201ENST00000621223 471 ntBASIC6.49□□□□□ -1.37
COPB1P53618 MIR6806-201ENST00000622141 64 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC020763.5-201ENST00000623298 430 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC022400.9-201ENST00000623633 273 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC009452.1-201ENST00000640823 606 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC137056.2-201ENST00000624055 1958 ntBASIC6.49□□□□□ -1.37
COPB1P53618 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPB1P53618 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COPB1P53618 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 AL355488.2-201ENST00000609909 2850 ntBASIC6.48□□□□□ -1.37
COPB1P53618 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 AC140479.2-201ENST00000421567 3130 ntBASIC6.48□□□□□ -1.37
COPB1P53618 RBMY1HP-201ENST00000382759 1389 ntBASIC6.48□□□□□ -1.37
COPB1P53618 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.48□□□□□ -1.37
COPB1P53618 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
COPB1P53618 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COPB1P53618 AL354868.1-201ENST00000417077 482 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.48□□□□□ -1.37
COPB1P53618 CRIP1P1-201ENST00000427567 185 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AL590623.1-201ENST00000427864 105 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.48□□□□□ -1.37
COPB1P53618 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 AC096775.1-201ENST00000437724 448 ntBASIC6.48□□□□□ -1.37
COPB1P53618 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 RN7SL552P-201ENST00000462094 276 ntBASIC6.48□□□□□ -1.37
COPB1P53618 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 RPS27P20-201ENST00000492051 246 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 RNA5SP473-201ENST00000516402 125 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.48□□□□□ -1.37
COPB1P53618 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 AL049874.4-201ENST00000557593 255 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 AC098483.2-201ENST00000603158 454 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AC005899.7-201ENST00000618199 588 ntBASIC6.48□□□□□ -1.37
COPB1P53618 MIR6823-201ENST00000622118 61 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AL356490.1-201ENST00000623079 479 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AC022919.1-201ENST00000624979 626 ntBASIC6.48□□□□□ -1.37
COPB1P53618 AP001153.1-201ENST00000641024 338 ntBASIC6.48□□□□□ -1.37
COPB1P53618 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COPB1P53618 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.48□□□□□ -1.37
COPB1P53618 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COPB1P53618 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COPB1P53618 NCOA4P2-201ENST00000340589 1813 ntBASIC6.48□□□□□ -1.37
COPB1P53618 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms