Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 AC098826.1-201ENST00000433943 471 ntBASIC7.59□□□□□ -1.19
USP11P51784 PSMD8P1-201ENST00000436275 769 ntBASIC7.59□□□□□ -1.19
USP11P51784 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.59□□□□□ -1.19
USP11P51784 UBBP5-201ENST00000446970 266 ntBASIC7.59□□□□□ -1.19
USP11P51784 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.59□□□□□ -1.19
USP11P51784 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.59□□□□□ -1.19
USP11P51784 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 OR5H7P-201ENST00000514084 930 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC7.59□□□□□ -1.19
USP11P51784 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 HMGN1P26-201ENST00000558737 303 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.59□□□□□ -1.19
USP11P51784 AP003115.1-201ENST00000569849 463 ntBASIC7.59□□□□□ -1.19
USP11P51784 RPL29P33-201ENST00000587474 316 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC074141.1-201ENST00000588129 2995 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC011921.2-201ENST00000589465 152 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC036176.3-201ENST00000602456 418 ntBASIC7.59□□□□□ -1.19
USP11P51784 AL590229.1-201ENST00000603497 542 ntBASIC7.59□□□□□ -1.19
USP11P51784 AC099842.1-201ENST00000619919 596 ntBASIC7.59□□□□□ -1.19
USP11P51784 AL359740.1-201ENST00000624340 592 ntBASIC7.59□□□□□ -1.19
USP11P51784 AL357562.1-201ENST00000624911 609 ntBASIC7.59□□□□□ -1.19
USP11P51784 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.59□□□□□ -1.19
USP11P51784 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 AC007485.2-201ENST00000623493 1667 ntBASIC7.59□□□□□ -1.19
USP11P51784 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.59□□□□□ -1.19
USP11P51784 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.59□□□□□ -1.19
USP11P51784 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
USP11P51784 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
USP11P51784 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
USP11P51784 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
USP11P51784 AC019072.1-201ENST00000604535 1551 ntBASIC7.59□□□□□ -1.2
USP11P51784 CASC19-281ENST00000642118 1554 ntBASIC7.59□□□□□ -1.2
USP11P51784 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.2
USP11P51784 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USP11P51784 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 SNORA38B-201ENST00000363524 131 ntBASIC7.58□□□□□ -1.2
USP11P51784 RNU1-24P-201ENST00000364285 165 ntBASIC7.58□□□□□ -1.2
USP11P51784 AL603865.2-201ENST00000401679 213 ntBASIC7.58□□□□□ -1.2
USP11P51784 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
USP11P51784 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.58□□□□□ -1.2
USP11P51784 RNA5SP155-201ENST00000411154 129 ntBASIC7.58□□□□□ -1.2
USP11P51784 Z68694.1-201ENST00000413929 841 ntBASIC7.58□□□□□ -1.2
USP11P51784 RPS3AP37-201ENST00000419176 745 ntBASIC7.58□□□□□ -1.2
USP11P51784 VN1R42P-201ENST00000424651 344 ntBASIC7.58□□□□□ -1.2
USP11P51784 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 MTATP6P13-201ENST00000438531 667 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC092393.1-201ENST00000439625 742 ntBASIC7.58□□□□□ -1.2
USP11P51784 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AC104978.1-201ENST00000449387 391 ntBASIC7.58□□□□□ -1.2
USP11P51784 AL445991.1-201ENST00000450381 475 ntBASIC7.58□□□□□ -1.2
USP11P51784 RNU7-125P-201ENST00000458760 62 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 GAPDHP71-201ENST00000511530 1003 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AC109635.3-201ENST00000529536 185 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AC005519.1-201ENST00000554490 601 ntBASIC7.58□□□□□ -1.2
USP11P51784 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 AC234778.2-201ENST00000566241 354 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.58□□□□□ -1.2
USP11P51784 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.58□□□□□ -1.2
USP11P51784 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 AC015818.6-201ENST00000584274 634 ntBASIC7.58□□□□□ -1.2
USP11P51784 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 AL096803.3-201ENST00000609032 532 ntBASIC7.58□□□□□ -1.2
USP11P51784 AL354718.1-201ENST00000619764 589 ntBASIC7.58□□□□□ -1.2
USP11P51784 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.58□□□□□ -1.2
USP11P51784 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
USP11P51784 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.58□□□□□ -1.2
USP11P51784 FANCD2P2-201ENST00000437591 1400 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms