Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
MRE11P49959 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
MRE11P49959 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
MRE11P49959 AC022325.1-201ENST00000502748 2199 ntBASIC7.27□□□□□ -1.24
MRE11P49959 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
MRE11P49959 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
MRE11P49959 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.24
MRE11P49959 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 ADAM24P-201ENST00000398655 2101 ntBASIC7.27□□□□□ -1.25
MRE11P49959 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 RNA5SP308-201ENST00000362532 115 ntBASIC7.27□□□□□ -1.25
MRE11P49959 RPS3AP25-201ENST00000411660 793 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 OR13Z1P-201ENST00000416141 834 ntBASIC7.27□□□□□ -1.25
MRE11P49959 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 AC092447.3-201ENST00000426027 686 ntBASIC7.27□□□□□ -1.25
MRE11P49959 MTCO1P57-201ENST00000432182 261 ntBASIC7.27□□□□□ -1.25
MRE11P49959 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.27□□□□□ -1.25
MRE11P49959 MYL6P3-201ENST00000436904 432 ntBASIC7.27□□□□□ -1.25
MRE11P49959 RPS23P1-201ENST00000491662 432 ntBASIC7.27□□□□□ -1.25
MRE11P49959 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.27□□□□□ -1.25
MRE11P49959 SNX18P23-201ENST00000510867 677 ntBASIC7.27□□□□□ -1.25
MRE11P49959 MTATP6P1-201ENST00000514057 681 ntBASIC7.27□□□□□ -1.25
MRE11P49959 CYP4F27P-201ENST00000514557 494 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.27□□□□□ -1.25
MRE11P49959 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.27□□□□□ -1.25
MRE11P49959 MTND2P38-201ENST00000522536 667 ntBASIC7.27□□□□□ -1.25
MRE11P49959 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.27□□□□□ -1.25
MRE11P49959 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.27□□□□□ -1.25
MRE11P49959 AC026458.1-201ENST00000564330 438 ntBASIC7.27□□□□□ -1.25
MRE11P49959 MIR4502-201ENST00000580432 81 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 AC020915.5-201ENST00000596836 964 ntBASIC7.27□□□□□ -1.25
MRE11P49959 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 AC120053.1-201ENST00000607706 736 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC084782.3-201ENST00000612282 578 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC009032.1-201ENST00000617574 431 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AL138955.1-201ENST00000622881 1040 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC138907.10-201ENST00000623708 983 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC069542.2-201ENST00000624816 216 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC010608.3-201ENST00000625048 527 ntBASIC7.27□□□□□ -1.25
MRE11P49959 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
MRE11P49959 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
MRE11P49959 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
MRE11P49959 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 CR788268.1-201ENST00000603931 1809 ntBASIC7.27□□□□□ -1.25
MRE11P49959 MTCO1P15-201ENST00000529569 1526 ntBASIC7.27□□□□□ -1.25
MRE11P49959 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
MRE11P49959 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.26□□□□□ -1.25
MRE11P49959 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.26□□□□□ -1.25
MRE11P49959 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.26□□□□□ -1.25
MRE11P49959 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
MRE11P49959 RN7SKP186-201ENST00000365371 303 ntBASIC7.26□□□□□ -1.25
MRE11P49959 RNU11-6P-201ENST00000391127 133 ntBASIC7.26□□□□□ -1.25
MRE11P49959 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 AF228730.1-201ENST00000397972 663 ntBASIC7.26□□□□□ -1.25
MRE11P49959 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.26□□□□□ -1.25
MRE11P49959 SNORA77.2-201ENST00000408571 112 ntBASIC7.26□□□□□ -1.25
MRE11P49959 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.26□□□□□ -1.25
MRE11P49959 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.26□□□□□ -1.25
MRE11P49959 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.26□□□□□ -1.25
MRE11P49959 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.26□□□□□ -1.25
MRE11P49959 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.26□□□□□ -1.25
MRE11P49959 AC011242.1-201ENST00000433596 1158 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AL117351.1-201ENST00000438864 766 ntBASIC7.26□□□□□ -1.25
MRE11P49959 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.26□□□□□ -1.25
MRE11P49959 MORF4L1P4-201ENST00000450245 976 ntBASIC7.26□□□□□ -1.25
MRE11P49959 RN7SL552P-201ENST00000462094 276 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AC084754.1-201ENST00000463466 464 ntBASIC7.26□□□□□ -1.25
MRE11P49959 RPS3AP49-201ENST00000472161 790 ntBASIC7.26□□□□□ -1.25
MRE11P49959 RN7SL860P-201ENST00000473738 223 ntBASIC7.26□□□□□ -1.25
MRE11P49959 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 RPS3AP15-201ENST00000483874 781 ntBASIC7.26□□□□□ -1.25
MRE11P49959 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 RN7SL629P-201ENST00000489622 285 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AC105233.1-201ENST00000498840 781 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
MRE11P49959 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.26□□□□□ -1.25
MRE11P49959 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AL162632.2-201ENST00000553933 399 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.26□□□□□ -1.25
MRE11P49959 MIR378C-201ENST00000578683 81 ntBASIC7.26□□□□□ -1.25
MRE11P49959 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.26□□□□□ -1.25
MRE11P49959 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.26□□□□□ -1.25
MRE11P49959 AL021707.7-201ENST00000607991 416 ntBASIC7.26□□□□□ -1.25
MRE11P49959 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.26□□□□□ -1.25
MRE11P49959 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.26□□□□□ -1.25
MRE11P49959 uc_338.31-201ENST00000615595 186 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms