Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.17□□□□□ -1.42
LHX1P48742 AC021678.3-201ENST00000517893 476 ntBASIC6.17□□□□□ -1.42
LHX1P48742 AC112191.2-201ENST00000522428 333 ntBASIC6.17□□□□□ -1.42
LHX1P48742 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 IGBP1P1-201ENST00000554337 1009 ntBASIC6.17□□□□□ -1.42
LHX1P48742 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.17□□□□□ -1.42
LHX1P48742 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.17□□□□□ -1.42
LHX1P48742 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 AL034546.1-201ENST00000623740 3693 ntBASIC6.17□□□□□ -1.42
LHX1P48742 FBXL21-201ENST00000297158 1305 ntBASIC6.17□□□□□ -1.42
LHX1P48742 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 AC022164.1-201ENST00000568767 2673 ntBASIC6.17□□□□□ -1.42
LHX1P48742 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
LHX1P48742 AC068769.1-201ENST00000474767 2426 ntBASIC6.17□□□□□ -1.42
LHX1P48742 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
LHX1P48742 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.17□□□□□ -1.42
LHX1P48742 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
LHX1P48742 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 RNA5SP394-201ENST00000364216 119 ntBASIC6.16□□□□□ -1.42
LHX1P48742 RN7SKP81-201ENST00000365603 331 ntBASIC6.16□□□□□ -1.42
LHX1P48742 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX1P48742 AC092642.1-201ENST00000392417 425 ntBASIC6.16□□□□□ -1.42
LHX1P48742 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 AL357752.1-201ENST00000412817 349 ntBASIC6.16□□□□□ -1.42
LHX1P48742 OR2AT2P-201ENST00000413438 905 ntBASIC6.16□□□□□ -1.42
LHX1P48742 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX1P48742 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.16□□□□□ -1.42
LHX1P48742 FRG2FP-204ENST00000453982 852 ntBASIC6.16□□□□□ -1.42
LHX1P48742 RPS27AP2-201ENST00000457576 465 ntBASIC6.16□□□□□ -1.42
LHX1P48742 RPSAP37-201ENST00000470913 821 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AC006539.1-201ENST00000481419 501 ntBASIC6.16□□□□□ -1.42
LHX1P48742 RN7SL570P-201ENST00000484405 292 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AC009120.1-201ENST00000493458 473 ntBASIC6.16□□□□□ -1.42
LHX1P48742 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX1P48742 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX1P48742 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX1P48742 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX1P48742 HMGB1P42-201ENST00000532126 553 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AC010547.6-201ENST00000571789 193 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AC012146.2-201ENST00000576545 416 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.16□□□□□ -1.42
LHX1P48742 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.16□□□□□ -1.42
LHX1P48742 AP005212.4-201ENST00000614206 710 ntBASIC6.16□□□□□ -1.42
LHX1P48742 AC018659.2-201ENST00000624690 715 ntBASIC6.16□□□□□ -1.42
LHX1P48742 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.16□□□□□ -1.42
LHX1P48742 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.16□□□□□ -1.42
LHX1P48742 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LHX1P48742 AP004607.3-201ENST00000530354 3915 ntBASIC6.16□□□□□ -1.42
LHX1P48742 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LHX1P48742 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
LHX1P48742 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 AL161756.3-201ENST00000641216 2071 ntBASIC6.15□□□□□ -1.42
LHX1P48742 RN7SKP69-201ENST00000365390 305 ntBASIC6.15□□□□□ -1.42
LHX1P48742 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
LHX1P48742 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.15□□□□□ -1.42
LHX1P48742 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LHX1P48742 NAP1L4P2-201ENST00000425958 899 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 RPS23P6-201ENST00000466136 431 ntBASIC6.15□□□□□ -1.42
LHX1P48742 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.15□□□□□ -1.42
LHX1P48742 OR7E157P-201ENST00000494376 911 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.15□□□□□ -1.42
LHX1P48742 RNU6-615P-201ENST00000516065 106 ntBASIC6.15□□□□□ -1.42
LHX1P48742 snoU109.5-201ENST00000516231 132 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AC139365.2-201ENST00000517972 253 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AC078899.1-201ENST00000521432 1185 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.15□□□□□ -1.42
LHX1P48742 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 AC126615.2-201ENST00000553003 515 ntBASIC6.15□□□□□ -1.42
LHX1P48742 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 AC096996.1-201ENST00000563813 325 ntBASIC6.15□□□□□ -1.42
LHX1P48742 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.15□□□□□ -1.42
LHX1P48742 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.15□□□□□ -1.42
LHX1P48742 MIR4302-201ENST00000638058 60 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms