Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 NANOGNBP2-201ENST00000544753 553 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXD13P35453 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD13P35453 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD13P35453 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXD13P35453 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD13P35453 AC090953.1-201ENST00000604305 1092 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 BNIP3P7-201ENST00000605641 516 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.41□□□□□ -1.38
HOXD13P35453 MIR6071-201ENST00000616741 78 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 FO681491.1-202ENST00000623392 737 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HOXD13P35453 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD13P35453 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD13P35453 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD13P35453 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.41□□□□□ -1.38
HOXD13P35453 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD13P35453 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
HOXD13P35453 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD13P35453 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD13P35453 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD13P35453 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HOXD13P35453 AC011933.2-201ENST00000578539 2790 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AC083837.1-201ENST00000565297 2994 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD13P35453 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD13P35453 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
HOXD13P35453 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXD13P35453 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXD13P35453 SUGT1P2-201ENST00000379452 992 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD13P35453 AL392003.1-201ENST00000434394 243 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 KRT8P51-201ENST00000438938 274 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD13P35453 C1DP3-201ENST00000455013 423 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 RPL12P39-201ENST00000455456 496 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXD13P35453 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.4□□□□□ -1.38
HOXD13P35453 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD13P35453 SNORA70.17-201ENST00000516449 133 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AC139365.2-201ENST00000517972 253 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AP000648.1-201ENST00000529682 397 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD13P35453 AC078878.1-201ENST00000539832 958 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD13P35453 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 AL031601.1-201ENST00000605702 394 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AC100814.1-201ENST00000606963 623 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AL139099.4-201ENST00000614802 114 ntBASIC6.4□□□□□ -1.38
HOXD13P35453 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXD13P35453 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXD13P35453 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXD13P35453 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXD13P35453 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXD13P35453 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.4□□□□□ -1.39
HOXD13P35453 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 AC007114.2-201ENST00000576014 4281 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 RNU6-819P-201ENST00000364116 107 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD13P35453 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXD13P35453 VN1R12P-201ENST00000403778 876 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 RN7SKP240-201ENST00000410583 375 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 AC115283.1-201ENST00000427353 400 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 TUBB4BP6-201ENST00000437576 479 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 RSL24D1P2-201ENST00000445584 366 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD13P35453 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 HLA-DPA3-207ENST00000454398 229 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD13P35453 AL122020.1-201ENST00000472287 459 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 RN7SL57P-201ENST00000493687 290 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 SUMO2P4-201ENST00000504193 276 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD13P35453 AC006499.4-201ENST00000510947 694 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 RFPL4AP3-201ENST00000515267 345 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 WBP1LP3-201ENST00000523033 208 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD13P35453 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD13P35453 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HOXD13P35453 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXD13P35453 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXD13P35453 AC020658.4-201ENST00000613987 684 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 AC025262.3-201ENST00000623666 360 ntBASIC6.39□□□□□ -1.39
HOXD13P35453 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD13P35453 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXD13P35453 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms