Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.12□□□□□ -1.27
TM4SF1P30408 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.12□□□□□ -1.27
TM4SF1P30408 MTCO3P42-201ENST00000509488 518 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 MTCO3P39-201ENST00000514812 518 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.12□□□□□ -1.27
TM4SF1P30408 MIR4436B2-201ENST00000581415 91 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 MIR4436B1-201ENST00000583272 91 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.12□□□□□ -1.27
TM4SF1P30408 AC073342.3-201ENST00000624211 193 ntBASIC7.12□□□□□ -1.27
TM4SF1P30408 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
TM4SF1P30408 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
TM4SF1P30408 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
TM4SF1P30408 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.11□□□□□ -1.27
TM4SF1P30408 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.11□□□□□ -1.27
TM4SF1P30408 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
TM4SF1P30408 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 RNA5SP305-201ENST00000362665 119 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 AC015977.1-201ENST00000418887 292 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 AL133325.1-201ENST00000421090 382 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.11□□□□□ -1.27
TM4SF1P30408 AC079922.1-201ENST00000443291 359 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 AC004129.2-201ENST00000457229 287 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 RPEP1-201ENST00000504507 658 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.11□□□□□ -1.27
TM4SF1P30408 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.11□□□□□ -1.27
TM4SF1P30408 RN7SKP288-201ENST00000516227 268 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.11□□□□□ -1.27
TM4SF1P30408 BLZF2P-201ENST00000553776 1130 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.11□□□□□ -1.27
TM4SF1P30408 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.11□□□□□ -1.27
TM4SF1P30408 AC104785.1-201ENST00000603220 588 ntBASIC7.11□□□□□ -1.27
TM4SF1P30408 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.11□□□□□ -1.27
TM4SF1P30408 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
TM4SF1P30408 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.11□□□□□ -1.27
TM4SF1P30408 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
TM4SF1P30408 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TM4SF1P30408 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
TM4SF1P30408 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 OR6D1P-201ENST00000436165 939 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.1□□□□□ -1.27
TM4SF1P30408 MTCO3P17-201ENST00000443775 513 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.1□□□□□ -1.27
TM4SF1P30408 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 SNRPCP2-201ENST00000504370 475 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.1□□□□□ -1.27
TM4SF1P30408 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.1□□□□□ -1.27
TM4SF1P30408 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.1□□□□□ -1.27
TM4SF1P30408 AC244502.2-201ENST00000543361 851 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.1□□□□□ -1.27
TM4SF1P30408 AC011497.2-201ENST00000600255 639 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 AC090607.5-201ENST00000615692 224 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 WBP1LP8-201ENST00000617401 327 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 AP001784.1-201ENST00000624107 428 ntBASIC7.1□□□□□ -1.27
TM4SF1P30408 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
TM4SF1P30408 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.1□□□□□ -1.27
TM4SF1P30408 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
TM4SF1P30408 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
TM4SF1P30408 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
TM4SF1P30408 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TM4SF1P30408 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TM4SF1P30408 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
TM4SF1P30408 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
TM4SF1P30408 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
TM4SF1P30408 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
TM4SF1P30408 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.09□□□□□ -1.27
TM4SF1P30408 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.09□□□□□ -1.27
TM4SF1P30408 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.09□□□□□ -1.27
TM4SF1P30408 LDHAP2-201ENST00000437325 985 ntBASIC7.09□□□□□ -1.27
TM4SF1P30408 AL035690.1-201ENST00000490892 383 ntBASIC7.09□□□□□ -1.27
TM4SF1P30408 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms