Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC117394.1-201ENST00000477323 567 ntBASIC5.34□□□□□ -1.55
SHC1P29353 RPL38P3-201ENST00000484463 213 ntBASIC5.34□□□□□ -1.55
SHC1P29353 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHC1P29353 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.34□□□□□ -1.55
SHC1P29353 SCARNA18.1-201ENST00000516330 83 ntBASIC5.34□□□□□ -1.55
SHC1P29353 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.34□□□□□ -1.55
SHC1P29353 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.34□□□□□ -1.55
SHC1P29353 IGLV3-30-201ENST00000524362 298 ntBASIC5.34□□□□□ -1.55
SHC1P29353 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.34□□□□□ -1.55
SHC1P29353 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHC1P29353 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.34□□□□□ -1.55
SHC1P29353 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.34□□□□□ -1.55
SHC1P29353 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHC1P29353 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.34□□□□□ -1.55
SHC1P29353 GARSP1-201ENST00000570895 719 ntBASIC5.34□□□□□ -1.55
SHC1P29353 AC060780.2-201ENST00000589047 198 ntBASIC5.34□□□□□ -1.55
SHC1P29353 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.34□□□□□ -1.55
SHC1P29353 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.34□□□□□ -1.55
SHC1P29353 AC108865.2-201ENST00000606881 432 ntBASIC5.34□□□□□ -1.55
SHC1P29353 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.34□□□□□ -1.55
SHC1P29353 MIR6793-201ENST00000612376 63 ntBASIC5.34□□□□□ -1.55
SHC1P29353 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.34□□□□□ -1.55
SHC1P29353 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHC1P29353 AC139426.3-201ENST00000605648 2059 ntBASIC5.34□□□□□ -1.55
SHC1P29353 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SHC1P29353 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHC1P29353 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SHC1P29353 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHC1P29353 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.34□□□□□ -1.56
SHC1P29353 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHC1P29353 AL121839.2-201ENST00000565058 6943 ntBASIC5.34□□□□□ -1.56
SHC1P29353 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SHC1P29353 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
SHC1P29353 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.33□□□□□ -1.56
SHC1P29353 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHC1P29353 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 PARP4P2-201ENST00000446672 3326 ntBASIC5.33□□□□□ -1.56
SHC1P29353 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 RPS4XP5-201ENST00000419038 768 ntBASIC5.33□□□□□ -1.56
SHC1P29353 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 CDY8P-201ENST00000428380 1279 ntBASIC5.33□□□□□ -1.56
SHC1P29353 RPL5P2-201ENST00000429598 854 ntBASIC5.33□□□□□ -1.56
SHC1P29353 KATNBL1P2-201ENST00000433311 835 ntBASIC5.33□□□□□ -1.56
SHC1P29353 VN1R110P-201ENST00000438988 971 ntBASIC5.33□□□□□ -1.56
SHC1P29353 AL663074.2-201ENST00000440621 479 ntBASIC5.33□□□□□ -1.56
SHC1P29353 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SHC1P29353 AL157385.1-201ENST00000446973 268 ntBASIC5.33□□□□□ -1.56
SHC1P29353 CDY20P-201ENST00000447528 1279 ntBASIC5.33□□□□□ -1.56
SHC1P29353 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 AC093166.4-201ENST00000457867 318 ntBASIC5.33□□□□□ -1.56
SHC1P29353 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.33□□□□□ -1.56
SHC1P29353 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 AC097486.1-201ENST00000515331 210 ntBASIC5.33□□□□□ -1.56
SHC1P29353 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.33□□□□□ -1.56
SHC1P29353 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 AC006530.1-201ENST00000555980 571 ntBASIC5.33□□□□□ -1.56
SHC1P29353 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.33□□□□□ -1.56
SHC1P29353 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 AC020658.4-201ENST00000613987 684 ntBASIC5.33□□□□□ -1.56
SHC1P29353 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.33□□□□□ -1.56
SHC1P29353 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SHC1P29353 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 AC114774.1-201ENST00000507410 1770 ntBASIC5.33□□□□□ -1.56
SHC1P29353 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 AC020656.2-201ENST00000613291 5309 ntBASIC5.33□□□□□ -1.56
SHC1P29353 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SHC1P29353 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHC1P29353 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.33□□□□□ -1.56
SHC1P29353 THAP12P9-201ENST00000503971 2360 ntBASIC5.33□□□□□ -1.56
SHC1P29353 AC027088.4-201ENST00000611559 1947 ntBASIC5.33□□□□□ -1.56
SHC1P29353 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.32□□□□□ -1.56
SHC1P29353 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SHC1P29353 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.32□□□□□ -1.56
SHC1P29353 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
SHC1P29353 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.32□□□□□ -1.56
SHC1P29353 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 2628.9 ms