Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AL157702.1-201ENST00000398764 426 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AL161742.1-201ENST00000418154 584 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 RPS7P8-201ENST00000418311 581 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 OSTCP4-201ENST00000424397 449 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 NDUFB4P8-201ENST00000435351 367 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 OR3D1P-201ENST00000438288 955 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 RPS10P14-201ENST00000440748 502 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 CXCR2P1-202ENST00000443392 1074 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 RPS4XP17-201ENST00000479057 754 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 RPL34P33-201ENST00000486062 334 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 RN7SL350P-201ENST00000492591 299 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC021146.10-201ENST00000515628 706 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 MIR2117-201ENST00000516780 80 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC040958.1-201ENST00000561102 201 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AL390726.5-202ENST00000564800 256 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC083964.1-201ENST00000607549 630 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC000374.1-201ENST00000434698 1745 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AL731566.1-201ENST00000620490 1937 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DMAP28067 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.99□□□□□ -1.61
HLA-DMAP28067 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DMAP28067 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DMAP28067 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 LYARP1-201ENST00000436977 1501 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 RNA5SP211-201ENST00000365516 117 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 RNA5SP241-201ENST00000391326 114 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 RNA5SP156-201ENST00000410250 110 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 RN7SKP144-201ENST00000411108 279 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC002524.1-201ENST00000411687 547 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 COX5BP7-201ENST00000414780 274 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC113412.1-201ENST00000425840 504 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 VN1R21P-201ENST00000426703 765 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 GAPDHP37-201ENST00000442317 968 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL157385.1-201ENST00000446973 268 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC016027.4-201ENST00000450866 277 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC104164.1-201ENST00000460282 590 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC006539.1-201ENST00000481419 501 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC083795.1-201ENST00000491760 320 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 RPS17P5-201ENST00000498293 408 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC009567.2-201ENST00000502989 349 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC016559.2-201ENST00000510759 359 ntBASIC4.98□□□□□ -1.61
HLA-DMAP28067 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DMAP28067 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms