Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CD40P25942 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.99□□□□□ -1.45
CD40P25942 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CD40P25942 AL121950.1-201ENST00000624993 2077 ntBASIC5.98□□□□□ -1.45
CD40P25942 DLEU2L-201ENST00000371086 3555 ntBASIC5.98□□□□□ -1.45
CD40P25942 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CD40P25942 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.98□□□□□ -1.45
CD40P25942 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.98□□□□□ -1.45
CD40P25942 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 RNA5SP382-201ENST00000363355 112 ntBASIC5.98□□□□□ -1.45
CD40P25942 Y_RNA.192-201ENST00000363977 102 ntBASIC5.98□□□□□ -1.45
CD40P25942 RN7SKP191-201ENST00000364713 306 ntBASIC5.98□□□□□ -1.45
CD40P25942 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CD40P25942 RNU6-157P-201ENST00000383957 107 ntBASIC5.98□□□□□ -1.45
CD40P25942 Y_RNA.436-201ENST00000384097 102 ntBASIC5.98□□□□□ -1.45
CD40P25942 RNU5A-2P-201ENST00000384337 116 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL034417.1-201ENST00000399343 800 ntBASIC5.98□□□□□ -1.45
CD40P25942 RSL24D1P4-201ENST00000400938 484 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC244452.1-201ENST00000413798 141 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 PTPN2P1-201ENST00000423212 1072 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC000089.1-201ENST00000424559 801 ntBASIC5.98□□□□□ -1.45
CD40P25942 AHCYP8-201ENST00000425108 209 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC5.98□□□□□ -1.45
CD40P25942 RPP40P1-201ENST00000426762 456 ntBASIC5.98□□□□□ -1.45
CD40P25942 HMGN1P6-201ENST00000438508 291 ntBASIC5.98□□□□□ -1.45
CD40P25942 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 PA2G4P1-201ENST00000442248 1197 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL356121.1-201ENST00000442911 156 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 RPL31P44-201ENST00000447680 377 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 RPL7AP71-201ENST00000451120 739 ntBASIC5.98□□□□□ -1.45
CD40P25942 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 DNAJC19P8-201ENST00000452887 259 ntBASIC5.98□□□□□ -1.45
CD40P25942 NPM1P9-201ENST00000453156 844 ntBASIC5.98□□□□□ -1.45
CD40P25942 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 NMNAT1P3-201ENST00000457517 888 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 RN7SKP198-201ENST00000459286 306 ntBASIC5.98□□□□□ -1.45
CD40P25942 RPL7P48-201ENST00000461513 746 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC026348.1-201ENST00000462549 1053 ntBASIC5.98□□□□□ -1.45
CD40P25942 RAP1BP2-201ENST00000478270 544 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC009567.2-201ENST00000502989 349 ntBASIC5.98□□□□□ -1.45
CD40P25942 MRPL57P6-201ENST00000506570 309 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 MINOS1P4-201ENST00000515470 318 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC093878.1-201ENST00000515630 432 ntBASIC5.98□□□□□ -1.45
CD40P25942 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.98□□□□□ -1.45
CD40P25942 MTCO1P49-201ENST00000523429 802 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.98□□□□□ -1.45
CD40P25942 OR7E154P-201ENST00000525174 932 ntBASIC5.98□□□□□ -1.45
CD40P25942 KCTD9P4-201ENST00000526766 1166 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.98□□□□□ -1.45
CD40P25942 AC124293.1-201ENST00000530034 493 ntBASIC5.98□□□□□ -1.45
CD40P25942 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CD40P25942 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.98□□□□□ -1.45
CD40P25942 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.98□□□□□ -1.45
CD40P25942 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 ELOCP32-201ENST00000548625 324 ntBASIC5.98□□□□□ -1.45
CD40P25942 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 DUXAP1-201ENST00000556632 463 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.98□□□□□ -1.45
CD40P25942 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.98□□□□□ -1.45
CD40P25942 AC068790.2-201ENST00000602601 557 ntBASIC5.98□□□□□ -1.45
CD40P25942 RPS4XP21-201ENST00000603814 750 ntBASIC5.98□□□□□ -1.45
CD40P25942 AL031281.1-201ENST00000604049 488 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC090525.3-201ENST00000605601 189 ntBASIC5.98□□□□□ -1.45
CD40P25942 OR2AS2P-201ENST00000606902 342 ntBASIC5.98□□□□□ -1.45
CD40P25942 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC145207.9-201ENST00000623802 325 ntBASIC5.98□□□□□ -1.45
CD40P25942 AP001962.1-201ENST00000624114 559 ntBASIC5.98□□□□□ -1.45
CD40P25942 AC087821.2-201ENST00000637086 450 ntBASIC5.98□□□□□ -1.45
CD40P25942 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CD40P25942 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms