Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 RN7SKP128-201ENST00000364270 303 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
XRCC1P18887 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
XRCC1P18887 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
XRCC1P18887 AC016739.1-201ENST00000405359 345 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 SNRPEP6-201ENST00000407465 277 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 RPS3P2-201ENST00000421346 701 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 BX276092.6-201ENST00000430476 250 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.83□□□□□ -1.48
XRCC1P18887 BX276092.8-201ENST00000455722 250 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AC011476.1-201ENST00000466725 307 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AC124945.1-201ENST00000485133 188 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 PCNAP4-201ENST00000532690 730 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.83□□□□□ -1.48
XRCC1P18887 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.83□□□□□ -1.48
XRCC1P18887 AC092121.1-201ENST00000569452 202 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 RNA5SP439-201ENST00000617595 124 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.83□□□□□ -1.48
XRCC1P18887 AP000550.3-201ENST00000637734 379 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.83□□□□□ -1.48
XRCC1P18887 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.83□□□□□ -1.48
XRCC1P18887 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
XRCC1P18887 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
XRCC1P18887 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
XRCC1P18887 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 SELENOWP1-201ENST00000322792 252 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
XRCC1P18887 TMSB4XP2-201ENST00000335179 210 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 RNU1-150P-201ENST00000362491 162 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.82□□□□□ -1.48
XRCC1P18887 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 RPL23AP19-201ENST00000436229 369 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
XRCC1P18887 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.82□□□□□ -1.48
XRCC1P18887 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 CCDC11P1-201ENST00000503137 1162 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.82□□□□□ -1.48
XRCC1P18887 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.82□□□□□ -1.48
XRCC1P18887 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 AL356801.1-201ENST00000559320 294 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.82□□□□□ -1.48
XRCC1P18887 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
XRCC1P18887 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
XRCC1P18887 AC004656.1-201ENST00000568479 4951 ntBASIC5.82□□□□□ -1.48
XRCC1P18887 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
XRCC1P18887 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
XRCC1P18887 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
XRCC1P18887 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 AC114774.1-201ENST00000507410 1770 ntBASIC5.81□□□□□ -1.48
XRCC1P18887 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.81□□□□□ -1.48
XRCC1P18887 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.81□□□□□ -1.48
XRCC1P18887 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
XRCC1P18887 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
XRCC1P18887 MYL6P5-201ENST00000412707 459 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms