Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.13□□□□□ -1.43
KRT3P12035 AC027369.2-201ENST00000528030 440 ntBASIC6.13□□□□□ -1.43
KRT3P12035 PCNAP4-201ENST00000532690 730 ntBASIC6.13□□□□□ -1.43
KRT3P12035 AC006530.1-201ENST00000555980 571 ntBASIC6.13□□□□□ -1.43
KRT3P12035 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.13□□□□□ -1.43
KRT3P12035 LINC00556-201ENST00000569603 412 ntBASIC6.13□□□□□ -1.43
KRT3P12035 MIR4433B-201ENST00000581329 102 ntBASIC6.13□□□□□ -1.43
KRT3P12035 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.13□□□□□ -1.43
KRT3P12035 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.13□□□□□ -1.43
KRT3P12035 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 AC107993.1-201ENST00000591343 684 ntBASIC6.13□□□□□ -1.43
KRT3P12035 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.13□□□□□ -1.43
KRT3P12035 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.13□□□□□ -1.43
KRT3P12035 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.13□□□□□ -1.43
KRT3P12035 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.13□□□□□ -1.43
KRT3P12035 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
KRT3P12035 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
KRT3P12035 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 GTF2IP4-201ENST00000453092 2054 ntBASIC6.13□□□□□ -1.43
KRT3P12035 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
KRT3P12035 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
KRT3P12035 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 AC004386.1-201ENST00000393214 761 ntBASIC6.12□□□□□ -1.43
KRT3P12035 IFIT1P1-201ENST00000400497 1449 ntBASIC6.12□□□□□ -1.43
KRT3P12035 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 CAP1P2-201ENST00000417455 1409 ntBASIC6.12□□□□□ -1.43
KRT3P12035 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 AC110602.1-201ENST00000437414 318 ntBASIC6.12□□□□□ -1.43
KRT3P12035 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 EIF5AP4-201ENST00000441206 465 ntBASIC6.12□□□□□ -1.43
KRT3P12035 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 RN7SL170P-201ENST00000487098 295 ntBASIC6.12□□□□□ -1.43
KRT3P12035 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.12□□□□□ -1.43
KRT3P12035 ST13P12-201ENST00000508958 1094 ntBASIC6.12□□□□□ -1.43
KRT3P12035 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.12□□□□□ -1.43
KRT3P12035 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.12□□□□□ -1.43
KRT3P12035 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 AL356801.1-201ENST00000559320 294 ntBASIC6.12□□□□□ -1.43
KRT3P12035 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.12□□□□□ -1.43
KRT3P12035 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
KRT3P12035 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 AC024884.1-201ENST00000620583 399 ntBASIC6.12□□□□□ -1.43
KRT3P12035 AL137058.3-201ENST00000624531 3099 ntBASIC6.12□□□□□ -1.43
KRT3P12035 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.12□□□□□ -1.43
KRT3P12035 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
KRT3P12035 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.12□□□□□ -1.43
KRT3P12035 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
KRT3P12035 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 AC012078.1-201ENST00000405035 1646 ntBASIC6.11□□□□□ -1.43
KRT3P12035 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 PDZK1P1-202ENST00000425209 1350 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AC117409.1-201ENST00000470499 1310 ntBASIC6.11□□□□□ -1.43
KRT3P12035 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
KRT3P12035 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 RNA5SP273-201ENST00000362484 113 ntBASIC6.11□□□□□ -1.43
KRT3P12035 RPL11P3-201ENST00000395256 523 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AC099535.1-201ENST00000408928 371 ntBASIC6.11□□□□□ -1.43
KRT3P12035 RN7SKP29-201ENST00000410957 272 ntBASIC6.11□□□□□ -1.43
KRT3P12035 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 AC019205.1-201ENST00000421830 730 ntBASIC6.11□□□□□ -1.43
KRT3P12035 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.11□□□□□ -1.43
KRT3P12035 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.11□□□□□ -1.43
KRT3P12035 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.11□□□□□ -1.43
KRT3P12035 RPL12P39-201ENST00000455456 496 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AP002884.1-201ENST00000479691 655 ntBASIC6.11□□□□□ -1.43
KRT3P12035 PDCL3P4-201ENST00000489621 720 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AC025458.1-201ENST00000506046 166 ntBASIC6.11□□□□□ -1.43
KRT3P12035 OR5H7P-201ENST00000514084 930 ntBASIC6.11□□□□□ -1.43
KRT3P12035 RNA5SP438-201ENST00000516561 112 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.11□□□□□ -1.43
KRT3P12035 AC126615.2-201ENST00000553003 515 ntBASIC6.11□□□□□ -1.43
KRT3P12035 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms