Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC009804.1-201ENST00000400949 179 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC116036.1-201ENST00000412199 367 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 OR7E116P-201ENST00000448529 957 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 LDHBP2-201ENST00000456969 1005 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 OR2AO1P-201ENST00000476497 403 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC6P09630 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC093270.2-201ENST00000486157 792 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC024558.1-201ENST00000505008 528 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC6P09630 RNA5SP92-201ENST00000516437 110 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC021678.3-201ENST00000517893 476 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC6P09630 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 uc_338.26-201ENST00000612659 160 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXC6P09630 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 MIR8080-201ENST00000622224 89 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 AC021766.1-201ENST00000624404 741 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 AL662795.2-201ENST00000624252 3706 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
HOXC6P09630 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXC6P09630 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 MRE11P1-201ENST00000464884 2127 ntBASIC6.61□□□□□ -1.35
HOXC6P09630 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HOXC6P09630 AC092724.1-201ENST00000624623 3397 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
HOXC6P09630 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC6P09630 AC114786.1-201ENST00000512892 1415 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC6P09630 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC6P09630 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
HOXC6P09630 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
HOXC6P09630 AL159987.1-201ENST00000347911 293 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 RNA5SP183-201ENST00000362452 119 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC6P09630 OR6C71P-201ENST00000432580 913 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 SUMO2P1-206ENST00000445436 284 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AL049829.1-201ENST00000465411 156 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AC100832.1-201ENST00000471945 383 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC6P09630 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC6P09630 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC6P09630 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXC6P09630 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC6P09630 AL512329.2-201ENST00000607350 548 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AC239803.2-201ENST00000610161 430 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AL133445.2-201ENST00000611191 527 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 AC008115.4-201ENST00000619780 775 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXC6P09630 CASC19-222ENST00000641321 1173 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 AL355377.1-201ENST00000621125 1653 ntBASIC6.6□□□□□ -1.35
HOXC6P09630 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXC6P09630 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXC6P09630 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 USP9YP3-201ENST00000434481 1766 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AC025470.1-201ENST00000510053 2032 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC6P09630 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC6P09630 GAPDHP42-201ENST00000406848 981 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AL357752.1-201ENST00000412817 349 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.59□□□□□ -1.35
HOXC6P09630 RPS27P18-201ENST00000431701 247 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 CNOT7P2-201ENST00000441051 832 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC6P09630 RANP1-206ENST00000455094 651 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 RN7SL329P-201ENST00000467740 299 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AC004815.1-201ENST00000484185 331 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms