Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM1P09493 MGAT2P2-201ENST00000427194 797 ntBASIC6.34□□□□□ -1.39
TPM1P09493 PSMD8P1-201ENST00000436275 769 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 GAPDHP14-201ENST00000450472 937 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AC004129.2-201ENST00000457229 287 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AC092865.4-201ENST00000477936 615 ntBASIC6.34□□□□□ -1.39
TPM1P09493 RPS4XP17-201ENST00000479057 754 ntBASIC6.34□□□□□ -1.39
TPM1P09493 EIF3LP3-201ENST00000495197 822 ntBASIC6.34□□□□□ -1.39
TPM1P09493 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM1P09493 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM1P09493 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 AC107993.1-201ENST00000591343 684 ntBASIC6.34□□□□□ -1.39
TPM1P09493 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 AC145423.1-201ENST00000605712 336 ntBASIC6.34□□□□□ -1.39
TPM1P09493 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 U91328.4-201ENST00000608919 517 ntBASIC6.34□□□□□ -1.39
TPM1P09493 GAPDHP41-201ENST00000613707 975 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AL162574.1-201ENST00000615702 950 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AC091059.2-201ENST00000623355 614 ntBASIC6.34□□□□□ -1.39
TPM1P09493 AC073488.3-201ENST00000631611 778 ntBASIC6.34□□□□□ -1.39
TPM1P09493 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM1P09493 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM1P09493 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM1P09493 ICE2P1-201ENST00000512800 1849 ntBASIC6.34□□□□□ -1.4
TPM1P09493 AC008079.2-201ENST00000623543 20396 ntBASIC6.34□□□□□ -1.4
TPM1P09493 RBPJP7-201ENST00000442803 1447 ntBASIC6.33□□□□□ -1.4
TPM1P09493 RBPJP5-201ENST00000449433 1447 ntBASIC6.33□□□□□ -1.4
TPM1P09493 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TPM1P09493 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM1P09493 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 U3.7-201ENST00000363668 216 ntBASIC6.33□□□□□ -1.4
TPM1P09493 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 SNORA70.6-201ENST00000383934 134 ntBASIC6.33□□□□□ -1.4
TPM1P09493 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
TPM1P09493 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 GNG5P5-201ENST00000420444 220 ntBASIC6.33□□□□□ -1.4
TPM1P09493 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.33□□□□□ -1.4
TPM1P09493 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM1P09493 AC108479.1-201ENST00000431142 427 ntBASIC6.33□□□□□ -1.4
TPM1P09493 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
TPM1P09493 AC092106.1-201ENST00000444291 373 ntBASIC6.33□□□□□ -1.4
TPM1P09493 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM1P09493 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 AC021146.10-201ENST00000515628 706 ntBASIC6.33□□□□□ -1.4
TPM1P09493 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM1P09493 AC036111.2-201ENST00000533247 901 ntBASIC6.33□□□□□ -1.4
TPM1P09493 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
TPM1P09493 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.33□□□□□ -1.4
TPM1P09493 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.33□□□□□ -1.4
TPM1P09493 AC011891.2-201ENST00000604949 397 ntBASIC6.33□□□□□ -1.4
TPM1P09493 AL034374.2-201ENST00000605281 548 ntBASIC6.33□□□□□ -1.4
TPM1P09493 AC008833.1-201ENST00000611633 691 ntBASIC6.33□□□□□ -1.4
TPM1P09493 AL021918.2-201ENST00000613415 194 ntBASIC6.33□□□□□ -1.4
TPM1P09493 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM1P09493 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
TPM1P09493 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM1P09493 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.32□□□□□ -1.4
TPM1P09493 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM1P09493 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
TPM1P09493 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 AC019205.1-201ENST00000421830 730 ntBASIC6.32□□□□□ -1.4
TPM1P09493 DEFA9P-201ENST00000433042 285 ntBASIC6.32□□□□□ -1.4
TPM1P09493 RPS12P17-201ENST00000438591 377 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 RPL36AP55-201ENST00000454114 305 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM1P09493 RN7SL72P-201ENST00000460697 269 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 H3F3AP5-201ENST00000475267 429 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AC099521.1-201ENST00000482557 334 ntBASIC6.32□□□□□ -1.4
TPM1P09493 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.32□□□□□ -1.4
TPM1P09493 AL512652.1-201ENST00000619006 500 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AC211486.4-201ENST00000621495 113 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AL138693.1-201ENST00000622219 129 ntBASIC6.32□□□□□ -1.4
TPM1P09493 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.32□□□□□ -1.4
TPM1P09493 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.32□□□□□ -1.4
TPM1P09493 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
TPM1P09493 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.32□□□□□ -1.4
TPM1P09493 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TPM1P09493 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms