Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.79□□□□□ -1.64
CTSDP07339 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.79□□□□□ -1.64
CTSDP07339 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.79□□□□□ -1.64
CTSDP07339 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.79□□□□□ -1.64
CTSDP07339 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.79□□□□□ -1.64
CTSDP07339 MIR6823-201ENST00000622118 61 ntBASIC4.79□□□□□ -1.64
CTSDP07339 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTSDP07339 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.79□□□□□ -1.64
CTSDP07339 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.79□□□□□ -1.64
CTSDP07339 HSPA8P14-201ENST00000552265 1805 ntBASIC4.79□□□□□ -1.64
CTSDP07339 TCP11X1-202ENST00000622971 1372 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 SSXP3-201ENST00000442971 1300 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 MTCO1P28-201ENST00000574177 1528 ntBASIC4.78□□□□□ -1.64
CTSDP07339 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 OR4F13P-202ENST00000560066 2054 ntBASIC4.78□□□□□ -1.64
CTSDP07339 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTSDP07339 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.78□□□□□ -1.64
CTSDP07339 RPS14P4-201ENST00000415880 418 ntBASIC4.78□□□□□ -1.64
CTSDP07339 RNF10P1-201ENST00000418589 369 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.78□□□□□ -1.64
CTSDP07339 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 AC130360.1-201ENST00000425489 1117 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.78□□□□□ -1.64
CTSDP07339 RPS10P18-201ENST00000442662 495 ntBASIC4.78□□□□□ -1.64
CTSDP07339 OR7E116P-201ENST00000448529 957 ntBASIC4.78□□□□□ -1.64
CTSDP07339 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 PSAT1P4-201ENST00000466500 526 ntBASIC4.78□□□□□ -1.64
CTSDP07339 RPL29P23-201ENST00000486188 442 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.78□□□□□ -1.64
CTSDP07339 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.78□□□□□ -1.64
CTSDP07339 RNA5SP230-201ENST00000517039 122 ntBASIC4.78□□□□□ -1.64
CTSDP07339 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.78□□□□□ -1.64
CTSDP07339 AC130365.2-201ENST00000525882 1201 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.78□□□□□ -1.64
CTSDP07339 NPIPB14P-203ENST00000532298 987 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTSDP07339 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTSDP07339 AP005136.2-201ENST00000583253 1049 ntBASIC4.78□□□□□ -1.64
CTSDP07339 MIR7853-201ENST00000584820 132 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC092944.2-201ENST00000605443 889 ntBASIC4.78□□□□□ -1.64
CTSDP07339 OR51C1P-201ENST00000608504 942 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC010632.3-201ENST00000611377 369 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AL139099.4-201ENST00000614802 114 ntBASIC4.78□□□□□ -1.64
CTSDP07339 AC012676.3-201ENST00000614983 479 ntBASIC4.78□□□□□ -1.64
CTSDP07339 RFPL4AP6-201ENST00000616792 846 ntBASIC4.78□□□□□ -1.64
CTSDP07339 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CTSDP07339 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CTSDP07339 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 AC012254.3-201ENST00000591183 2117 ntBASIC4.78□□□□□ -1.64
CTSDP07339 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTSDP07339 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
CTSDP07339 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CTSDP07339 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.77□□□□□ -1.65
CTSDP07339 AC092376.2-201ENST00000622621 4116 ntBASIC4.77□□□□□ -1.65
CTSDP07339 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 PARP4P2-201ENST00000446672 3326 ntBASIC4.77□□□□□ -1.65
CTSDP07339 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTSDP07339 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 AL121886.1-201ENST00000358609 435 ntBASIC4.77□□□□□ -1.65
CTSDP07339 U3.7-201ENST00000363668 216 ntBASIC4.77□□□□□ -1.65
CTSDP07339 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTSDP07339 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CTSDP07339 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTSDP07339 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.77□□□□□ -1.65
CTSDP07339 AC096921.1-201ENST00000411661 375 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms