Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 THAP12P9-201ENST00000503971 2360 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CHRNA1P02708 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.37□□□□□ -1.39
CHRNA1P02708 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 CFL1P1-202ENST00000432948 411 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.37□□□□□ -1.39
CHRNA1P02708 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.37□□□□□ -1.39
CHRNA1P02708 SPRYD7P1-201ENST00000443861 570 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AL162739.1-201ENST00000450606 307 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 PFN1P6-201ENST00000476786 399 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 RPL38P3-201ENST00000484463 213 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 UBA52P7-201ENST00000486088 380 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.37□□□□□ -1.39
CHRNA1P02708 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 MIR1269B-201ENST00000580405 75 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 AC063977.5-201ENST00000601044 974 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AP003789.1-201ENST00000617737 605 ntBASIC6.37□□□□□ -1.39
CHRNA1P02708 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.37□□□□□ -1.39
CHRNA1P02708 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.37□□□□□ -1.39
CHRNA1P02708 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHRNA1P02708 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.36□□□□□ -1.39
CHRNA1P02708 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHRNA1P02708 AC114786.1-201ENST00000512892 1415 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 MAPK10-261ENST00000641050 3109 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CHRNA1P02708 RNU6-171P-201ENST00000384354 107 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.36□□□□□ -1.39
CHRNA1P02708 CUBNP2-201ENST00000443534 1139 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.36□□□□□ -1.39
CHRNA1P02708 AC011225.1-201ENST00000457751 369 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AL603882.1-201ENST00000463059 681 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 RPL35AP19-201ENST00000469425 329 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AC017007.3-201ENST00000479865 435 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CHRNA1P02708 MIR2117-201ENST00000516780 80 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AC008429.4-201ENST00000521201 182 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.36□□□□□ -1.39
CHRNA1P02708 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.36□□□□□ -1.39
CHRNA1P02708 AC004890.3-201ENST00000605566 1095 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 AL353684.1-201ENST00000622677 1120 ntBASIC6.36□□□□□ -1.39
CHRNA1P02708 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.36□□□□□ -1.39
CHRNA1P02708 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CHRNA1P02708 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHRNA1P02708 AP004289.1-201ENST00000436307 2205 ntBASIC6.35□□□□□ -1.39
CHRNA1P02708 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.35□□□□□ -1.39
CHRNA1P02708 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHRNA1P02708 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHRNA1P02708 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHRNA1P02708 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHRNA1P02708 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CHRNA1P02708 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.35□□□□□ -1.39
CHRNA1P02708 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms