Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC079807.1-201ENST00000429993 481 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 ZFAND6P1-201ENST00000434138 605 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AL731534.1-201ENST00000434711 269 ntBASIC6.21□□□□□ -1.42
MSI1O43347 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MSI1O43347 GEMIN2P1-201ENST00000454246 752 ntBASIC6.21□□□□□ -1.42
MSI1O43347 ACA64.4-201ENST00000459070 127 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AC023245.1-201ENST00000468501 517 ntBASIC6.21□□□□□ -1.42
MSI1O43347 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 AC093815.1-201ENST00000508637 280 ntBASIC6.21□□□□□ -1.42
MSI1O43347 SETP21-201ENST00000514799 892 ntBASIC6.21□□□□□ -1.42
MSI1O43347 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.21□□□□□ -1.42
MSI1O43347 SNORA70.17-201ENST00000516449 133 ntBASIC6.21□□□□□ -1.42
MSI1O43347 OR4A46P-201ENST00000527255 933 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.21□□□□□ -1.42
MSI1O43347 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.21□□□□□ -1.42
MSI1O43347 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.21□□□□□ -1.42
MSI1O43347 AC129778.1-202ENST00000623812 261 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AP001962.1-201ENST00000624114 559 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 AL591379.1-207ENST00000635982 261 ntBASIC6.21□□□□□ -1.42
MSI1O43347 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.21□□□□□ -1.42
MSI1O43347 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSI1O43347 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSI1O43347 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MSI1O43347 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
MSI1O43347 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MSI1O43347 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MSI1O43347 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 RN7SKP15-201ENST00000364742 309 ntBASIC6.2□□□□□ -1.42
MSI1O43347 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MSI1O43347 RN7SKP166-201ENST00000410812 305 ntBASIC6.2□□□□□ -1.42
MSI1O43347 RNU6-564P-201ENST00000410983 104 ntBASIC6.2□□□□□ -1.42
MSI1O43347 HMGN1P20-201ENST00000411849 300 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC007064.3-201ENST00000422608 359 ntBASIC6.2□□□□□ -1.42
MSI1O43347 CR848007.2-201ENST00000424918 787 ntBASIC6.2□□□□□ -1.42
MSI1O43347 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.2□□□□□ -1.42
MSI1O43347 RPS15AP29-201ENST00000445539 400 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 ACA64.1-201ENST00000459171 127 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 RPL23AP40-201ENST00000487630 390 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 WBP1LP3-201ENST00000523033 208 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.2□□□□□ -1.42
MSI1O43347 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.2□□□□□ -1.42
MSI1O43347 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.2□□□□□ -1.42
MSI1O43347 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.2□□□□□ -1.42
MSI1O43347 AL391001.1-201ENST00000602747 715 ntBASIC6.2□□□□□ -1.42
MSI1O43347 SNX18P12-201ENST00000624821 759 ntBASIC6.2□□□□□ -1.42
MSI1O43347 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.2□□□□□ -1.42
MSI1O43347 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MSI1O43347 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MSI1O43347 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.2□□□□□ -1.42
MSI1O43347 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MSI1O43347 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MSI1O43347 PARP4P2-201ENST00000446672 3326 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AC027088.4-201ENST00000611559 1947 ntBASIC6.19□□□□□ -1.42
MSI1O43347 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.19□□□□□ -1.42
MSI1O43347 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MSI1O43347 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 TRAV35-201ENST00000390462 330 ntBASIC6.19□□□□□ -1.42
MSI1O43347 HSFY1P1-201ENST00000423928 1178 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 AC242426.1-201ENST00000435270 960 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AL445928.1-201ENST00000435545 222 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AC013410.1-201ENST00000436223 1232 ntBASIC6.19□□□□□ -1.42
MSI1O43347 VN1R110P-201ENST00000438988 971 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 OR6C72P-201ENST00000451403 892 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.19□□□□□ -1.42
MSI1O43347 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms