Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RPS26P38-201ENST00000414476 348 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 RPS26P4-201ENST00000431743 355 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 PSMD10P2-201ENST00000432890 672 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AC007563.3-201ENST00000433233 371 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 OR3D1P-201ENST00000438288 955 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC006326.1-201ENST00000445465 787 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 GXYLT1P1-201ENST00000446657 490 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AC073476.1-201ENST00000452854 407 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.53□□□□□ -1.36
FOXN3O00409 AP001804.2-201ENST00000533932 910 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 OR4A6P-201ENST00000534364 970 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.53□□□□□ -1.36
FOXN3O00409 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 DNAJC19P3-201ENST00000594491 331 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.53□□□□□ -1.36
FOXN3O00409 SMIM12P1-201ENST00000603004 274 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 AL135999.3-201ENST00000610501 812 ntBASIC6.53□□□□□ -1.36
FOXN3O00409 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXN3O00409 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
FOXN3O00409 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXN3O00409 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
FOXN3O00409 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXN3O00409 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
FOXN3O00409 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 RNU6-650P-201ENST00000365658 111 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXN3O00409 GCNT6-201ENST00000379591 934 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 MIR188-201ENST00000385034 86 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 RPL10P10-201ENST00000403509 664 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 RPS15AP30-201ENST00000420976 390 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 HSFY7P-201ENST00000432672 318 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 HSFY8P-201ENST00000437934 318 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 RNF2P1-201ENST00000442955 1010 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 SUMO2P1-206ENST00000445436 284 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.52□□□□□ -1.37
FOXN3O00409 CCRL1P1-201ENST00000449542 1053 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 HSFY5P-201ENST00000453726 309 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AP000547.1-201ENST00000454360 617 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC092902.1-201ENST00000486999 259 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.52□□□□□ -1.37
FOXN3O00409 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC093763.2-201ENST00000505334 1223 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 AC016550.3-201ENST00000515706 767 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 SNORA81.2-201ENST00000516868 170 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.52□□□□□ -1.37
FOXN3O00409 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC113192.3-201ENST00000529152 742 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 NOP56P3-201ENST00000549457 385 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXN3O00409 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.52□□□□□ -1.37
FOXN3O00409 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXN3O00409 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXN3O00409 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXN3O00409 BNIP3P27-201ENST00000599991 412 ntBASIC6.52□□□□□ -1.37
FOXN3O00409 ZNF92P2-201ENST00000600543 1059 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms