Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL589863.1-201ENST00000595383 631 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC022149.1-201ENST00000596032 609 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 HIRAP1-201ENST00000605318 787 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL139124.1-201ENST00000609123 421 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 PACRG-210ENST00000611387 279 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL137067.2-201ENST00000621202 131 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC106782.7-201ENST00000624024 418 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC133555.5-201ENST00000624430 418 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL035425.4-201ENST00000624509 1063 ntBASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.06□□□□□ -1.92
CHKB-CPT1BH3BT56 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 OR10R3P-201ENST00000361688 942 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP321-201ENST00000362722 111 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 RNU12-2P-201ENST00000364789 156 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC024937.2-201ENST00000411669 1242 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 COX5BP7-201ENST00000414780 274 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 TAS2R2P-201ENST00000421146 910 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AL034379.1-201ENST00000423216 253 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC245047.6-201ENST00000445444 617 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 RPSAP48-201ENST00000466509 889 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 RPS26P39-201ENST00000469206 341 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 RNA5SP303-201ENST00000516192 130 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC144548.1-201ENST00000549577 324 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC126615.2-201ENST00000553003 515 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 PPIAP6-201ENST00000557078 499 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 IGHV3OR16-15-201ENST00000565463 414 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 MIR4327-201ENST00000581194 85 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC100843.3-201ENST00000591796 259 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 NANOGP3-201ENST00000605855 286 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 SNORD91B-202ENST00000608459 222 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AL731556.2-201ENST00000615610 770 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC140479.4-205ENST00000636339 820 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 FGL2-202ENST00000637771 989 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 AC012020.1-201ENST00000624541 1728 ntBASIC3.05□□□□□ -1.92
CHKB-CPT1BH3BT56 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms