Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC9.9□□□□□ -0.82
RTN4Q9NQC3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC9.9□□□□□ -0.82
RTN4Q9NQC3 AC009948.5-201ENST00000624360 4406 ntBASIC9.9□□□□□ -0.83
RTN4Q9NQC3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
RTN4Q9NQC3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 FMO8P-201ENST00000434461 1600 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 FTO-217ENST00000637001 1609 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ZSCAN9-204ENST00000527436 2062 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 KYNUP2-201ENST00000582280 1329 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC138915.4-201ENST00000565549 4147 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RNU1-120P-201ENST00000363009 157 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RNA5SP483-201ENST00000363431 118 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RPL35-202ENST00000373570 493 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RNU6-877P-201ENST00000383868 107 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RPS20P2-201ENST00000402520 389 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MTAPP2-201ENST00000437063 832 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AP000474.1-201ENST00000441465 680 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 DPPA3P1-201ENST00000448050 469 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 OR7E7P-201ENST00000455678 1012 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RN7SL417P-201ENST00000459938 265 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RPL12P42-201ENST00000481802 499 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AL079303.1-201ENST00000486611 463 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RN7SL482P-201ENST00000487928 298 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RN7SL242P-201ENST00000491451 297 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 IGKV1-27-201ENST00000498435 382 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC109927.1-203ENST00000507038 421 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC011411.1-201ENST00000509592 876 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RNU6-358P-201ENST00000516564 75 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 SNORA20.3-201ENST00000516880 132 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RNU6-714P-201ENST00000516963 103 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 HOXA-AS2-206ENST00000521159 800 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AP000424.1-202ENST00000523831 331 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 LINC02166-201ENST00000567544 721 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ULK4P2-205ENST00000570221 634 ntTSL 3 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC053481.3-201ENST00000577881 843 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MIR3680-2-201ENST00000578247 87 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MIR3680-1-201ENST00000581433 87 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC119751.8-201ENST00000597032 156 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC116447.1-201ENST00000613153 453 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MIR8089-201ENST00000620165 82 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 PFN1P2-202ENST00000621347 397 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC011389.3-201ENST00000623273 999 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AP003122.6-201ENST00000623831 495 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MAPK10-365ENST00000641902 3825 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC027228.2-201ENST00000567141 2154 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 BX322650.1-201ENST00000332359 2143 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC092447.10-201ENST00000620607 1652 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC034229.2-201ENST00000566945 2508 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 AC097714.1-201ENST00000511272 1647 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MAPK10-371ENST00000641952 5209 ntBASIC9.89□□□□□ -0.83
RTN4Q9NQC3 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC9.89□□□□□ -0.83
RTN4Q9NQC3 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 DDX50P1-201ENST00000438163 2400 ntBASIC9.88□□□□□ -0.83
RTN4Q9NQC3 TTC26-210ENST00000495038 1599 ntTSL 2 BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 AL049780.3-201ENST00000624612 1583 ntBASIC9.88□□□□□ -0.83
RTN4Q9NQC3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 MMP26-201ENST00000300762 989 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RTN4Q9NQC3 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms