Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 COX6B1P3-201ENST00000312310 260 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 RN7SKP279-201ENST00000411383 298 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 VN1R21P-201ENST00000426703 765 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 DEFA9P-201ENST00000433042 285 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ATP5LP2-201ENST00000440646 311 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 RPL12P39-201ENST00000455456 496 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC068228.1-201ENST00000461723 211 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AL117692.1-201ENST00000494283 713 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC122718.2-201ENST00000505325 591 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 RN7SKP183-201ENST00000517169 324 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC136777.2-201ENST00000522979 358 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 WBP1LP3-201ENST00000523033 208 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC084121.1-201ENST00000533882 835 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC091078.2-201ENST00000557145 559 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 MIR4776-2-201ENST00000580204 80 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC008507.3-201ENST00000585753 472 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC025857.2-201ENST00000602711 238 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC108673.3-201ENST00000609183 335 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC048341.3-201ENST00000619323 491 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 OR11H2-202ENST00000641517 1085 ntBASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LRRC40Q9H9A6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 NLRP3P1-201ENST00000622303 1785 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 RPL5P10-201ENST00000445207 894 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AL161722.1-201ENST00000446972 1032 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC118758.1-202ENST00000454719 225 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 RBBP4P1-201ENST00000502424 1276 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC105384.2-201ENST00000508433 640 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 LDHAP1-201ENST00000509421 992 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 GAPDHP71-201ENST00000511530 1003 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC026826.3-201ENST00000561747 158 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC015849.6-201ENST00000605454 474 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 NANOGP3-201ENST00000605855 286 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MIR6793-201ENST00000612376 63 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC244100.4-201ENST00000617747 388 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AL591926.1-201ENST00000620542 217 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AL683826.1-201ENST00000624104 627 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC232271.1-201ENST00000602455 2715 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AP004607.3-201ENST00000530354 3915 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MFSD8-239ENST00000641590 2479 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC117409.1-201ENST00000470499 1310 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC027088.4-201ENST00000611559 1947 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 AC138907.8-201ENST00000623981 2256 ntBASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LRRC40Q9H9A6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRRC40Q9H9A6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms