Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC005297.1-201ENST00000444765 862 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 IGBP1P1-201ENST00000554337 1009 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 HSPD1P8-201ENST00000400121 1658 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AP001157.1-201ENST00000550837 2339 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 AC005224.3-201ENST00000584683 2140 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 YES1P1-201ENST00000418510 1628 ntBASIC6.25□□□□□ -1.41
NXF3Q9H4D5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC027279.4-201ENST00000624371 2072 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL121835.1-201ENST00000404250 354 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 RNU1-88P-201ENST00000459274 128 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 SLC25A51P1-201ENST00000468432 871 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC006539.1-201ENST00000481419 501 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 RPS3AP15-201ENST00000483874 781 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC105384.2-201ENST00000508433 640 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 TOMM22P4-201ENST00000511318 336 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 ATP5LP3-201ENST00000514223 304 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL049872.1-201ENST00000556323 322 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 MIR4489-201ENST00000578869 62 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC063977.5-201ENST00000601044 974 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC008115.3-201ENST00000614874 549 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL691477.1-201ENST00000624398 162 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AL390318.1-201ENST00000624564 687 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 LINC02019-201ENST00000608605 2060 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 AC114786.1-201ENST00000512892 1415 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 CIR1P2-201ENST00000514821 1342 ntBASIC6.24□□□□□ -1.41
NXF3Q9H4D5 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
NXF3Q9H4D5 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 AC130360.2-201ENST00000533477 1556 ntBASIC6.23□□□□□ -1.41
NXF3Q9H4D5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.23□□□□□ -1.41
NXF3Q9H4D5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.23□□□□□ -1.41
NXF3Q9H4D5 AL391361.1-201ENST00000405580 489 ntBASIC6.23□□□□□ -1.41
NXF3Q9H4D5 NIFKP3-201ENST00000417799 865 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms