Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 RNA5SP400-201ENST00000517155 111 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC113191.1-201ENST00000517759 403 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 OR7E13P-201ENST00000526052 910 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC087894.1-201ENST00000538359 518 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 MIR5010-201ENST00000582846 120 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AL008723.3-201ENST00000608926 449 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC105105.5-201ENST00000622635 1294 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC097520.1-201ENST00000624435 385 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC092111.2-201ENST00000611627 1414 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 NCOA4P2-201ENST00000340589 1813 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 MAPK10-287ENST00000641217 3037 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AL645568.2-201ENST00000432815 1337 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 AP000547.3-204ENST00000588548 2523 ntBASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM54Q9BYV2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 MAPK10-261ENST00000641050 3109 ntBASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 AP003486.1-201ENST00000525716 3994 ntBASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM54Q9BYV2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 RNU1-59P-201ENST00000364829 162 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 VIM2P-201ENST00000402383 1294 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC106883.1-201ENST00000418805 562 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 MTCYBP21-201ENST00000443300 1113 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL096829.2-201ENST00000446582 742 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC015524.1-201ENST00000491585 472 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 OR4A40P-201ENST00000533878 948 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 HMGN1P26-201ENST00000558737 303 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC007494.1-201ENST00000562293 760 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC021483.2-201ENST00000567415 758 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 RN7SL66P-201ENST00000582099 264 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 EIF1P5-201ENST00000585002 234 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC091057.3-201ENST00000602684 733 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC005034.4-201ENST00000603612 899 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 NDUFB9P1-201ENST00000604683 510 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC022001.1-201ENST00000605193 268 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AL121652.1-201ENST00000608851 448 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 U1.25-201ENST00000614085 162 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 U1.34-201ENST00000618578 162 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 U1.31-201ENST00000620022 160 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 MIR7159-201ENST00000620587 66 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC068787.1-201ENST00000623908 691 ntBASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM54Q9BYV2 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms