Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.67□□□□□ -1.18
SYNGAP1Q96PV0 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC034111.1-201ENST00000562143 3770 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PPIAP24-201ENST00000328558 471 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RNU4-75P-201ENST00000364621 146 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PSMA6P1-201ENST00000400275 741 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC003989.1-201ENST00000434569 565 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MTCO2P16-201ENST00000436962 677 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 DNAJA1P5-201ENST00000440278 943 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PTENP1-201ENST00000447117 1215 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RPS14P8-201ENST00000478778 369 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MTND2P14-201ENST00000482139 351 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC008410.1-201ENST00000483777 339 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 RN7SL101P-201ENST00000496350 279 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 XKRY-201ENST00000510392 1100 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC093664.1-201ENST00000511779 289 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 SNORA74.1-201ENST00000516320 180 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 HMGB1P1-201ENST00000522557 636 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 MTCO2P15-201ENST00000532655 656 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL445383.1-201ENST00000554689 874 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC025918.2-201ENST00000558683 763 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL139286.2-201ENST00000606838 396 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL133243.1-201ENST00000614487 366 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 SNX18P10-201ENST00000625014 519 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 AL021877.2-201ENST00000624442 10684 ntBASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNGAP1Q96PV0 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 RARSP1-201ENST00000542842 1418 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 MTCO1P11-201ENST00000429111 1528 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AC007938.1-201ENST00000562524 2902 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AL021331.1-201ENST00000402817 582 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 AL121835.1-201ENST00000404250 354 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 CYCSP17-201ENST00000407870 315 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 RNA5SP198-201ENST00000410376 127 ntBASIC7.65□□□□□ -1.18
SYNGAP1Q96PV0 RPS3AP37-201ENST00000419176 745 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms