Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL355834.1-201ENST00000556602 3965 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC130304.1-201ENST00000622942 2385 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RNA5SP510-201ENST00000364697 99 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RN7SKP15-201ENST00000364742 309 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SNORA11.3-201ENST00000408471 128 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL365220.1-201ENST00000432923 399 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 DEFA9P-201ENST00000433042 285 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RPS12P17-201ENST00000438591 377 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RPL12P11-201ENST00000439970 501 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC023141.8-201ENST00000442554 208 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AP006222.1-205ENST00000450734 457 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC093166.4-201ENST00000457867 318 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC011476.1-201ENST00000466725 307 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RPL12P24-201ENST00000474907 486 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RPL38P3-201ENST00000484463 213 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AP000648.1-201ENST00000529682 397 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 TRIM51DP-201ENST00000529746 596 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 HNRNPCP1-201ENST00000556181 766 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 MIR4310-201ENST00000582950 57 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AL031601.1-201ENST00000605702 394 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SNORA11.6-201ENST00000619030 128 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 AC069234.4-201ENST00000621276 412 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPRD1AQ96P16 NEPNP-201ENST00000404786 1371 ntBASIC6.06□□□□□ -1.44
RPRD1AQ96P16 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC093671.1-201ENST00000624981 2929 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 OR52B3P-201ENST00000314715 928 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 RNA5SP500-201ENST00000364486 119 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AL451046.1-201ENST00000406097 534 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC245060.4-201ENST00000413293 1121 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AL512637.1-201ENST00000439523 1231 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 MIR2117-201ENST00000516780 80 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC244502.2-201ENST00000543361 851 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC007346.2-201ENST00000564816 892 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 AC068769.1-201ENST00000474767 2426 ntBASIC6.05□□□□□ -1.44
RPRD1AQ96P16 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPRD1AQ96P16 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPRD1AQ96P16 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms